Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC11.11□□□□□ -0.63
Col6a5A6H584 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col6a5A6H584 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Mir877-201ENSMUST00000104738 85 ntBASIC11.1□□□□□ -0.63
Col6a5A6H584 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.1□□□□□ -0.63
Col6a5A6H584 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Col6a5A6H584 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Col6a5A6H584 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.1□□□□□ -0.63
Col6a5A6H584 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.1□□□□□ -0.63
Col6a5A6H584 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.1□□□□□ -0.63
Col6a5A6H584 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Col6a5A6H584 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.1□□□□□ -0.63
Col6a5A6H584 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col6a5A6H584 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Gm12585-201ENSMUST00000117307 290 ntBASIC11.09□□□□□ -0.63
Col6a5A6H584 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.09□□□□□ -0.63
Col6a5A6H584 Gm42627-201ENSMUST00000197347 224 ntBASIC11.09□□□□□ -0.63
Col6a5A6H584 Gm43133-201ENSMUST00000197472 463 ntBASIC11.09□□□□□ -0.63
Col6a5A6H584 Gm45880-201ENSMUST00000213041 853 ntBASIC11.09□□□□□ -0.63
Col6a5A6H584 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.09□□□□□ -0.63
Col6a5A6H584 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.09□□□□□ -0.63
Col6a5A6H584 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.09□□□□□ -0.63
Col6a5A6H584 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.09□□□□□ -0.63
Col6a5A6H584 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Col6a5A6H584 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.09□□□□□ -0.63
Col6a5A6H584 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.09□□□□□ -0.63
Col6a5A6H584 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.09□□□□□ -0.63
Col6a5A6H584 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.09□□□□□ -0.63
Col6a5A6H584 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Col6a5A6H584 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col6a5A6H584 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.08□□□□□ -0.64
Col6a5A6H584 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.08□□□□□ -0.64
Col6a5A6H584 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.08□□□□□ -0.64
Col6a5A6H584 Gm43947-201ENSMUST00000203019 959 ntBASIC11.08□□□□□ -0.64
Col6a5A6H584 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.08□□□□□ -0.64
Col6a5A6H584 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.08□□□□□ -0.64
Col6a5A6H584 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Gm22334-201ENSMUST00000158070 133 ntBASIC11.08□□□□□ -0.64
Col6a5A6H584 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms