Protein–RNA interactions for Protein: A2ACT7

Col9a3, Collagen, type IX, alpha 3, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3A2ACT7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col9a3A2ACT7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a3A2ACT7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a3A2ACT7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Gm6222-201ENSMUST00000120787 396 ntBASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col9a3A2ACT7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Gm22189-201ENSMUST00000103822 86 ntBASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Gm2451-201ENSMUST00000199447 999 ntBASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Gm10290-201ENSMUST00000200451 999 ntBASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Gm9908-201ENSMUST00000211534 448 ntBASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a3A2ACT7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a3A2ACT7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms