Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccdc194A0A140LIT1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Rps4l-201ENSMUST00000071745 943 ntBASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ccdc194A0A140LIT1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Gm34391-201ENSMUST00000203706 907 ntBASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc194A0A140LIT1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc194A0A140LIT1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Gm15173-201ENSMUST00000122049 433 ntBASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc194A0A140LIT1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc194A0A140LIT1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc194A0A140LIT1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc194A0A140LIT1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Ccdc194A0A140LIT1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc194A0A140LIT1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccdc194A0A140LIT1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccdc194A0A140LIT1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms