Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm7889-201ENSMUST00000185591 958 ntBASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.28□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3n-3A0A0G2JEM0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.27□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav3n-3A0A0G2JEM0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav3n-3A0A0G2JEM0 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms