Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm7222-201ENSMUST00000117512 906 ntBASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm18489-201ENSMUST00000172565 551 ntBASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav21-dv12A0A075B6C4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Rps4l-201ENSMUST00000071745 943 ntBASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm10819-201ENSMUST00000099988 561 ntBASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms