Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm4459-201ENSMUST00000118750 468 ntBASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm10499-201ENSMUST00000174094 934 ntBASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm5837-201ENSMUST00000191844 1369 ntBASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6d-5A0A075B6B9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm25745-201ENSMUST00000174945 133 ntBASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.99□□□□□ -0.49
Trav6d-5A0A075B6B9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm6433-201ENSMUST00000118634 875 ntBASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms