Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.2□□□□□ -0.46
Trav18A0A075B656 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav18A0A075B656 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Gm18489-201ENSMUST00000172565 551 ntBASIC12.19□□□□□ -0.46
Trav18A0A075B656 Gm28033-201ENSMUST00000184224 96 ntBASIC12.19□□□□□ -0.46
Trav18A0A075B656 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.19□□□□□ -0.46
Trav18A0A075B656 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav18A0A075B656 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.18□□□□□ -0.46
Trav18A0A075B656 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Gm37153-201ENSMUST00000193637 231 ntBASIC12.18□□□□□ -0.46
Trav18A0A075B656 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Gm6089-201ENSMUST00000197666 938 ntBASIC12.18□□□□□ -0.46
Trav18A0A075B656 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav18A0A075B656 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.18□□□□□ -0.46
Trav18A0A075B656 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav18A0A075B656 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Gm25990-201ENSMUST00000102440 86 ntBASIC12.17□□□□□ -0.46
Trav18A0A075B656 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav18A0A075B656 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.17□□□□□ -0.46
Trav18A0A075B656 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Trav18A0A075B656 Gm5682-201ENSMUST00000173402 505 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms