Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Mir6982-201ENSMUST00000184354 68 ntBASIC11.82□□□□□ -0.52
Trav17A0A075B655 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav17A0A075B655 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.82□□□□□ -0.52
Trav17A0A075B655 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.82□□□□□ -0.52
Trav17A0A075B655 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav17A0A075B655 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav17A0A075B655 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav17A0A075B655 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.8□□□□□ -0.52
Trav17A0A075B655 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.8□□□□□ -0.52
Trav17A0A075B655 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Gm15358-201ENSMUST00000119249 520 ntBASIC11.8□□□□□ -0.52
Trav17A0A075B655 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.8□□□□□ -0.52
Trav17A0A075B655 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms