Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Gm9172-201ENSMUST00000212092 954 ntBASIC11.5□□□□□ -0.57
Trav16A0A075B653 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav16A0A075B653 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.5□□□□□ -0.57
Trav16A0A075B653 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav16A0A075B653 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Gm9013-201ENSMUST00000132939 882 ntBASIC11.49□□□□□ -0.57
Trav16A0A075B653 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.49□□□□□ -0.57
Trav16A0A075B653 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav16A0A075B653 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.49□□□□□ -0.57
Trav16A0A075B653 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16A0A075B653 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Gm15039-201ENSMUST00000118914 875 ntBASIC11.48□□□□□ -0.57
Trav16A0A075B653 Gm13312-201ENSMUST00000119631 718 ntBASIC11.48□□□□□ -0.57
Trav16A0A075B653 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav16A0A075B653 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms