Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Birc2-201ENSMUST00000054878 378 ntBASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav5-4A0A075B652 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav5-4A0A075B652 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5-4A0A075B652 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5-4A0A075B652 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5-4A0A075B652 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5-4A0A075B652 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5-4A0A075B652 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5-4A0A075B652 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5-4A0A075B652 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav5-4A0A075B652 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.46□□□□□ -0.42
Trav5-4A0A075B652 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trav5-4A0A075B652 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Gm10499-201ENSMUST00000174094 934 ntBASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Gm34391-201ENSMUST00000203706 907 ntBASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav5-4A0A075B652 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Gm27459-201ENSMUST00000184860 107 ntBASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav5-4A0A075B652 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5-4A0A075B652 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5-4A0A075B652 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5-4A0A075B652 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5-4A0A075B652 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.43□□□□□ -0.42
Trav5-4A0A075B652 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.43□□□□□ -0.42
Trav5-4A0A075B652 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav5-4A0A075B652 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms