Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Grk6-207ENSMUST00000225925 2769 ntBASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Gm10013-201ENSMUST00000106074 672 ntBASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Gm12008-201ENSMUST00000117791 755 ntBASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16nA0A075B634 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Gm15039-201ENSMUST00000118914 875 ntBASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Rprl3-201ENSMUST00000157400 290 ntBASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.25□□□□□ -0.61
Trav16nA0A075B634 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav16nA0A075B634 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms