Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Gm6222-201ENSMUST00000120787 396 ntBASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Gm20445-201ENSMUST00000061905 565 ntBASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav8n-2A0A075B633 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Gm8515-201ENSMUST00000194852 576 ntBASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Gm18187-201ENSMUST00000196476 984 ntBASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Gm6218-201ENSMUST00000219812 628 ntBASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trav8n-2A0A075B633 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Gm14928-201ENSMUST00000120198 477 ntBASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms