Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv4A0A075B5I2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Gm8749-201ENSMUST00000117737 331 ntBASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Gm16198-201ENSMUST00000118766 670 ntBASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Gm13464-201ENSMUST00000119418 935 ntBASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Gm5177-201ENSMUST00000183092 997 ntBASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Psmb5-202ENSMUST00000227257 622 ntBASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv4A0A075B5I2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Thap2-203ENSMUST00000218989 527 ntBASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Gm10154-201ENSMUST00000084445 354 ntBASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv4A0A075B5I2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv4A0A075B5I2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms