Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Upk1bQ9Z2C6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.69■□□□□ 0.9
Upk1bQ9Z2C6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Upk1bQ9Z2C6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upk1bQ9Z2C6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upk1bQ9Z2C6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upk1bQ9Z2C6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upk1bQ9Z2C6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.68■□□□□ 0.9
Upk1bQ9Z2C6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Upk1bQ9Z2C6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Upk1bQ9Z2C6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Upk1bQ9Z2C6 Gm37136-201ENSMUST00000194368 194 ntBASIC20.67■□□□□ 0.9
Upk1bQ9Z2C6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Upk1bQ9Z2C6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Upk1bQ9Z2C6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.66■□□□□ 0.9
Upk1bQ9Z2C6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Upk1bQ9Z2C6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Upk1bQ9Z2C6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.66■□□□□ 0.9
Upk1bQ9Z2C6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Upk1bQ9Z2C6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Upk1bQ9Z2C6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Upk1bQ9Z2C6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Upk1bQ9Z2C6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Upk1bQ9Z2C6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Upk1bQ9Z2C6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Upk1bQ9Z2C6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Upk1bQ9Z2C6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Upk1bQ9Z2C6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Upk1bQ9Z2C6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Upk1bQ9Z2C6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Upk1bQ9Z2C6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Upk1bQ9Z2C6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Upk1bQ9Z2C6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Upk1bQ9Z2C6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.63■□□□□ 0.89
Upk1bQ9Z2C6 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.63■□□□□ 0.89
Upk1bQ9Z2C6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk1bQ9Z2C6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk1bQ9Z2C6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upk1bQ9Z2C6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.61■□□□□ 0.89
Upk1bQ9Z2C6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Upk1bQ9Z2C6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upk1bQ9Z2C6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Upk1bQ9Z2C6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upk1bQ9Z2C6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upk1bQ9Z2C6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upk1bQ9Z2C6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Upk1bQ9Z2C6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upk1bQ9Z2C6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upk1bQ9Z2C6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Upk1bQ9Z2C6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Upk1bQ9Z2C6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upk1bQ9Z2C6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upk1bQ9Z2C6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.59■□□□□ 0.89
Upk1bQ9Z2C6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Upk1bQ9Z2C6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Upk1bQ9Z2C6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upk1bQ9Z2C6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Upk1bQ9Z2C6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Upk1bQ9Z2C6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Upk1bQ9Z2C6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Upk1bQ9Z2C6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Upk1bQ9Z2C6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Upk1bQ9Z2C6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Upk1bQ9Z2C6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Upk1bQ9Z2C6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Upk1bQ9Z2C6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Upk1bQ9Z2C6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upk1bQ9Z2C6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upk1bQ9Z2C6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upk1bQ9Z2C6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.56■□□□□ 0.88
Upk1bQ9Z2C6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upk1bQ9Z2C6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upk1bQ9Z2C6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Upk1bQ9Z2C6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upk1bQ9Z2C6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Upk1bQ9Z2C6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Upk1bQ9Z2C6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Upk1bQ9Z2C6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Upk1bQ9Z2C6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Upk1bQ9Z2C6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.54■□□□□ 0.88
Upk1bQ9Z2C6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Upk1bQ9Z2C6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Upk1bQ9Z2C6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Upk1bQ9Z2C6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.53■□□□□ 0.88
Upk1bQ9Z2C6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk1bQ9Z2C6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Upk1bQ9Z2C6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Upk1bQ9Z2C6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Upk1bQ9Z2C6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Upk1bQ9Z2C6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Upk1bQ9Z2C6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Upk1bQ9Z2C6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Upk1bQ9Z2C6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Upk1bQ9Z2C6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Upk1bQ9Z2C6 Nkain2-201ENSMUST00000092602 558 ntBASIC20.51■□□□□ 0.87
Upk1bQ9Z2C6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Upk1bQ9Z2C6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk1bQ9Z2C6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Upk1bQ9Z2C6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Upk1bQ9Z2C6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms