Protein–RNA interactions for Protein: Q9Z0E3

Aire, Autoimmune regulator, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AireQ9Z0E3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AireQ9Z0E3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.7■□□□□ 0.74
AireQ9Z0E3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AireQ9Z0E3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AireQ9Z0E3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
AireQ9Z0E3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
AireQ9Z0E3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
AireQ9Z0E3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AireQ9Z0E3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AireQ9Z0E3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
AireQ9Z0E3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AireQ9Z0E3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AireQ9Z0E3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
AireQ9Z0E3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
AireQ9Z0E3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AireQ9Z0E3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
AireQ9Z0E3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
AireQ9Z0E3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AireQ9Z0E3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
AireQ9Z0E3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
AireQ9Z0E3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
AireQ9Z0E3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AireQ9Z0E3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AireQ9Z0E3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AireQ9Z0E3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AireQ9Z0E3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AireQ9Z0E3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
AireQ9Z0E3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AireQ9Z0E3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AireQ9Z0E3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AireQ9Z0E3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
AireQ9Z0E3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AireQ9Z0E3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AireQ9Z0E3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AireQ9Z0E3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AireQ9Z0E3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
AireQ9Z0E3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AireQ9Z0E3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.65■□□□□ 0.74
AireQ9Z0E3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AireQ9Z0E3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
AireQ9Z0E3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AireQ9Z0E3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
AireQ9Z0E3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AireQ9Z0E3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AireQ9Z0E3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AireQ9Z0E3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AireQ9Z0E3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AireQ9Z0E3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AireQ9Z0E3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.63■□□□□ 0.73
AireQ9Z0E3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.63■□□□□ 0.73
AireQ9Z0E3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AireQ9Z0E3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AireQ9Z0E3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.62■□□□□ 0.73
AireQ9Z0E3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.62■□□□□ 0.73
AireQ9Z0E3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AireQ9Z0E3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AireQ9Z0E3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
AireQ9Z0E3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AireQ9Z0E3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AireQ9Z0E3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AireQ9Z0E3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AireQ9Z0E3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
AireQ9Z0E3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.61■□□□□ 0.73
AireQ9Z0E3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
AireQ9Z0E3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AireQ9Z0E3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.6■□□□□ 0.73
AireQ9Z0E3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AireQ9Z0E3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AireQ9Z0E3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AireQ9Z0E3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AireQ9Z0E3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AireQ9Z0E3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AireQ9Z0E3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AireQ9Z0E3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AireQ9Z0E3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
AireQ9Z0E3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AireQ9Z0E3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AireQ9Z0E3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.72
AireQ9Z0E3 Scarna2-201ENSMUST00000157560 414 ntBASIC19.58■□□□□ 0.72
AireQ9Z0E3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
AireQ9Z0E3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AireQ9Z0E3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AireQ9Z0E3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AireQ9Z0E3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AireQ9Z0E3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
AireQ9Z0E3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
AireQ9Z0E3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AireQ9Z0E3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
AireQ9Z0E3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AireQ9Z0E3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AireQ9Z0E3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AireQ9Z0E3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
AireQ9Z0E3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AireQ9Z0E3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
AireQ9Z0E3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
AireQ9Z0E3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AireQ9Z0E3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.56■□□□□ 0.72
AireQ9Z0E3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AireQ9Z0E3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AireQ9Z0E3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms