Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19,42■□□□□ 0,7
Nubp1Q9R060 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19,42■□□□□ 0,7
Nubp1Q9R060 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19,42■□□□□ 0,7
Nubp1Q9R060 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19,42■□□□□ 0,7
Nubp1Q9R060 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19,42■□□□□ 0,7
Nubp1Q9R060 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19,42■□□□□ 0,7
Nubp1Q9R060 Gm14121-201ENSMUST00000121441 1380 ntBASIC19,42■□□□□ 0,7
Nubp1Q9R060 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19,41■□□□□ 0,7
Nubp1Q9R060 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19,41■□□□□ 0,7
Nubp1Q9R060 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19,41■□□□□ 0,7
Nubp1Q9R060 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19,4■□□□□ 0,7
Nubp1Q9R060 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19,4■□□□□ 0,7
Nubp1Q9R060 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19,4■□□□□ 0,7
Nubp1Q9R060 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19,39■□□□□ 0,69
Nubp1Q9R060 Etf1-202ENSMUST00000180351 108 ntBASIC19,39■□□□□ 0,69
Nubp1Q9R060 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19,39■□□□□ 0,69
Nubp1Q9R060 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19,39■□□□□ 0,69
Nubp1Q9R060 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19,39■□□□□ 0,69
Nubp1Q9R060 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19,38■□□□□ 0,69
Nubp1Q9R060 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19,38■□□□□ 0,69
Nubp1Q9R060 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19,38■□□□□ 0,69
Nubp1Q9R060 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19,38■□□□□ 0,69
Nubp1Q9R060 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19,38■□□□□ 0,69
Nubp1Q9R060 Gm10232-201ENSMUST00000089221 720 ntBASIC19,38■□□□□ 0,69
Nubp1Q9R060 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19,37■□□□□ 0,69
Nubp1Q9R060 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19,37■□□□□ 0,69
Nubp1Q9R060 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19,37■□□□□ 0,69
Nubp1Q9R060 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19,37■□□□□ 0,69
Nubp1Q9R060 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19,37■□□□□ 0,69
Nubp1Q9R060 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19,37■□□□□ 0,69
Nubp1Q9R060 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19,37■□□□□ 0,69
Nubp1Q9R060 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19,37■□□□□ 0,69
Nubp1Q9R060 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19,37■□□□□ 0,69
Nubp1Q9R060 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19,37■□□□□ 0,69
Nubp1Q9R060 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19,36■□□□□ 0,69
Nubp1Q9R060 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19,36■□□□□ 0,69
Nubp1Q9R060 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19,36■□□□□ 0,69
Nubp1Q9R060 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19,36■□□□□ 0,69
Nubp1Q9R060 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19,35■□□□□ 0,69
Nubp1Q9R060 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19,35■□□□□ 0,69
Nubp1Q9R060 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19,35■□□□□ 0,69
Nubp1Q9R060 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19,35■□□□□ 0,69
Nubp1Q9R060 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19,34■□□□□ 0,69
Nubp1Q9R060 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19,34■□□□□ 0,69
Nubp1Q9R060 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19,33■□□□□ 0,69
Nubp1Q9R060 Gm13241-201ENSMUST00000094493 780 ntBASIC19,33■□□□□ 0,68
Nubp1Q9R060 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19,32■□□□□ 0,68
Nubp1Q9R060 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19,32■□□□□ 0,68
Nubp1Q9R060 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19,32■□□□□ 0,68
Nubp1Q9R060 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19,31■□□□□ 0,68
Nubp1Q9R060 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19,31■□□□□ 0,68
Nubp1Q9R060 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19,31■□□□□ 0,68
Nubp1Q9R060 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19,31■□□□□ 0,68
Nubp1Q9R060 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19,31■□□□□ 0,68
Nubp1Q9R060 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19,3■□□□□ 0,68
Nubp1Q9R060 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19,3■□□□□ 0,68
Nubp1Q9R060 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19,3■□□□□ 0,68
Nubp1Q9R060 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19,3■□□□□ 0,68
Nubp1Q9R060 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19,3■□□□□ 0,68
Nubp1Q9R060 Serp2-204ENSMUST00000228055 705 ntBASIC19,3■□□□□ 0,68
Nubp1Q9R060 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19,3■□□□□ 0,68
Nubp1Q9R060 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19,3■□□□□ 0,68
Nubp1Q9R060 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19,3■□□□□ 0,68
Nubp1Q9R060 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19,3■□□□□ 0,68
Nubp1Q9R060 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19,3■□□□□ 0,68
Nubp1Q9R060 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19,29■□□□□ 0,68
Nubp1Q9R060 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19,29■□□□□ 0,68
Nubp1Q9R060 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19,29■□□□□ 0,68
Nubp1Q9R060 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19,29■□□□□ 0,68
Nubp1Q9R060 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19,29■□□□□ 0,68
Nubp1Q9R060 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19,29■□□□□ 0,68
Nubp1Q9R060 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19,29■□□□□ 0,68
Nubp1Q9R060 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19,29■□□□□ 0,68
Nubp1Q9R060 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19,29■□□□□ 0,68
Nubp1Q9R060 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19,28■□□□□ 0,68
Nubp1Q9R060 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19,28■□□□□ 0,68
Nubp1Q9R060 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19,28■□□□□ 0,68
Nubp1Q9R060 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19,28■□□□□ 0,68
Nubp1Q9R060 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19,28■□□□□ 0,68
Nubp1Q9R060 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19,28■□□□□ 0,68
Nubp1Q9R060 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19,28■□□□□ 0,68
Nubp1Q9R060 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19,27■□□□□ 0,68
Nubp1Q9R060 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19,27■□□□□ 0,68
Nubp1Q9R060 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19,27■□□□□ 0,68
Nubp1Q9R060 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19,27■□□□□ 0,67
Nubp1Q9R060 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19,27■□□□□ 0,67
Nubp1Q9R060 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19,26■□□□□ 0,67
Nubp1Q9R060 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19,26■□□□□ 0,67
Nubp1Q9R060 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19,26■□□□□ 0,67
Nubp1Q9R060 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19,26■□□□□ 0,67
Nubp1Q9R060 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19,26■□□□□ 0,67
Nubp1Q9R060 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19,26■□□□□ 0,67
Nubp1Q9R060 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19,26■□□□□ 0,67
Nubp1Q9R060 Gm37847-201ENSMUST00000192163 1497 ntBASIC19,26■□□□□ 0,67
Nubp1Q9R060 Gm31748-201ENSMUST00000194938 1497 ntBASIC19,26■□□□□ 0,67
Nubp1Q9R060 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19,26■□□□□ 0,67
Nubp1Q9R060 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19,25■□□□□ 0,67
Nubp1Q9R060 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19,25■□□□□ 0,67
Nubp1Q9R060 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19,25■□□□□ 0,67
Nubp1Q9R060 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19,25■□□□□ 0,67
Retrieved 100 of 76,532 protein–RNA pairs in 38,5 ms