Protein–RNA interactions for Protein: Q9ESJ4

Nckipsd, NCK-interacting protein with SH3 domain, mousemouse

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NckipsdQ9ESJ4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NckipsdQ9ESJ4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NckipsdQ9ESJ4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
NckipsdQ9ESJ4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NckipsdQ9ESJ4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.37■■□□□ 1.33
NckipsdQ9ESJ4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
NckipsdQ9ESJ4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NckipsdQ9ESJ4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.37■■□□□ 1.33
NckipsdQ9ESJ4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
NckipsdQ9ESJ4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
NckipsdQ9ESJ4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
NckipsdQ9ESJ4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NckipsdQ9ESJ4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NckipsdQ9ESJ4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.36■■□□□ 1.33
NckipsdQ9ESJ4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
NckipsdQ9ESJ4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.36■■□□□ 1.33
NckipsdQ9ESJ4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NckipsdQ9ESJ4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NckipsdQ9ESJ4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NckipsdQ9ESJ4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NckipsdQ9ESJ4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.35■■□□□ 1.33
NckipsdQ9ESJ4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
NckipsdQ9ESJ4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NckipsdQ9ESJ4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.34■■□□□ 1.33
NckipsdQ9ESJ4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
NckipsdQ9ESJ4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NckipsdQ9ESJ4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NckipsdQ9ESJ4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.33■■□□□ 1.33
NckipsdQ9ESJ4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
NckipsdQ9ESJ4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
NckipsdQ9ESJ4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
NckipsdQ9ESJ4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NckipsdQ9ESJ4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NckipsdQ9ESJ4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NckipsdQ9ESJ4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
NckipsdQ9ESJ4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NckipsdQ9ESJ4 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.31■■□□□ 1.32
NckipsdQ9ESJ4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
NckipsdQ9ESJ4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NckipsdQ9ESJ4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.31■■□□□ 1.32
NckipsdQ9ESJ4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.3■■□□□ 1.32
NckipsdQ9ESJ4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.3■■□□□ 1.32
NckipsdQ9ESJ4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NckipsdQ9ESJ4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NckipsdQ9ESJ4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NckipsdQ9ESJ4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NckipsdQ9ESJ4 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.3■■□□□ 1.32
NckipsdQ9ESJ4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NckipsdQ9ESJ4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NckipsdQ9ESJ4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NckipsdQ9ESJ4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NckipsdQ9ESJ4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
NckipsdQ9ESJ4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
NckipsdQ9ESJ4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
NckipsdQ9ESJ4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NckipsdQ9ESJ4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
NckipsdQ9ESJ4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NckipsdQ9ESJ4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.28■■□□□ 1.32
NckipsdQ9ESJ4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.28■■□□□ 1.32
NckipsdQ9ESJ4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NckipsdQ9ESJ4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NckipsdQ9ESJ4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NckipsdQ9ESJ4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NckipsdQ9ESJ4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NckipsdQ9ESJ4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
NckipsdQ9ESJ4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NckipsdQ9ESJ4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NckipsdQ9ESJ4 Gm13238-201ENSMUST00000117655 780 ntBASIC23.26■■□□□ 1.31
NckipsdQ9ESJ4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NckipsdQ9ESJ4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NckipsdQ9ESJ4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NckipsdQ9ESJ4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
NckipsdQ9ESJ4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
NckipsdQ9ESJ4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NckipsdQ9ESJ4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NckipsdQ9ESJ4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
NckipsdQ9ESJ4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NckipsdQ9ESJ4 Gm15546-201ENSMUST00000122095 826 ntBASIC23.25■■□□□ 1.31
NckipsdQ9ESJ4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.25■■□□□ 1.31
NckipsdQ9ESJ4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
NckipsdQ9ESJ4 Gm43566-201ENSMUST00000196851 808 ntBASIC23.24■■□□□ 1.31
NckipsdQ9ESJ4 Gm45444-201ENSMUST00000211394 898 ntBASIC23.24■■□□□ 1.31
NckipsdQ9ESJ4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NckipsdQ9ESJ4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.24■■□□□ 1.31
NckipsdQ9ESJ4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NckipsdQ9ESJ4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
NckipsdQ9ESJ4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NckipsdQ9ESJ4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NckipsdQ9ESJ4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NckipsdQ9ESJ4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NckipsdQ9ESJ4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NckipsdQ9ESJ4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NckipsdQ9ESJ4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NckipsdQ9ESJ4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NckipsdQ9ESJ4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NckipsdQ9ESJ4 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.21■■□□□ 1.31
NckipsdQ9ESJ4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.21■■□□□ 1.31
NckipsdQ9ESJ4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NckipsdQ9ESJ4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
NckipsdQ9ESJ4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms