Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chchd1Q9CQA6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.99■□□□□ 0.31
Chchd1Q9CQA6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chchd1Q9CQA6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chchd1Q9CQA6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chchd1Q9CQA6 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.99■□□□□ 0.31
Chchd1Q9CQA6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chchd1Q9CQA6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chchd1Q9CQA6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chchd1Q9CQA6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chchd1Q9CQA6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chchd1Q9CQA6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chchd1Q9CQA6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chchd1Q9CQA6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chchd1Q9CQA6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chchd1Q9CQA6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chchd1Q9CQA6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Chchd1Q9CQA6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chchd1Q9CQA6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Chchd1Q9CQA6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chchd1Q9CQA6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chchd1Q9CQA6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chchd1Q9CQA6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chchd1Q9CQA6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chchd1Q9CQA6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chchd1Q9CQA6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chchd1Q9CQA6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chchd1Q9CQA6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chchd1Q9CQA6 Gm25262-201ENSMUST00000174934 133 ntBASIC16.93■□□□□ 0.3
Chchd1Q9CQA6 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.93■□□□□ 0.3
Chchd1Q9CQA6 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.93■□□□□ 0.3
Chchd1Q9CQA6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chchd1Q9CQA6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Chchd1Q9CQA6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chchd1Q9CQA6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chchd1Q9CQA6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Chchd1Q9CQA6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chchd1Q9CQA6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chchd1Q9CQA6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chchd1Q9CQA6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chchd1Q9CQA6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chchd1Q9CQA6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chchd1Q9CQA6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chchd1Q9CQA6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.9■□□□□ 0.3
Chchd1Q9CQA6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chchd1Q9CQA6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chchd1Q9CQA6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.89■□□□□ 0.3
Chchd1Q9CQA6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.89■□□□□ 0.3
Chchd1Q9CQA6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chchd1Q9CQA6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Chchd1Q9CQA6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.89■□□□□ 0.29
Chchd1Q9CQA6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chchd1Q9CQA6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chchd1Q9CQA6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.89■□□□□ 0.29
Chchd1Q9CQA6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Chchd1Q9CQA6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chchd1Q9CQA6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chchd1Q9CQA6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chchd1Q9CQA6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chchd1Q9CQA6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chchd1Q9CQA6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chchd1Q9CQA6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chchd1Q9CQA6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chchd1Q9CQA6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chchd1Q9CQA6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chchd1Q9CQA6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chchd1Q9CQA6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chchd1Q9CQA6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chchd1Q9CQA6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.86■□□□□ 0.29
Chchd1Q9CQA6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chchd1Q9CQA6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chchd1Q9CQA6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chchd1Q9CQA6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Chchd1Q9CQA6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chchd1Q9CQA6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chchd1Q9CQA6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chchd1Q9CQA6 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.85■□□□□ 0.29
Chchd1Q9CQA6 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.85■□□□□ 0.29
Chchd1Q9CQA6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chchd1Q9CQA6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chchd1Q9CQA6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chchd1Q9CQA6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chchd1Q9CQA6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Chchd1Q9CQA6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chchd1Q9CQA6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chchd1Q9CQA6 Particl-201ENSMUST00000205370 1560 ntBASIC16.83■□□□□ 0.28
Chchd1Q9CQA6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chchd1Q9CQA6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chchd1Q9CQA6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chchd1Q9CQA6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chchd1Q9CQA6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chchd1Q9CQA6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chchd1Q9CQA6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chchd1Q9CQA6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chchd1Q9CQA6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chchd1Q9CQA6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.81■□□□□ 0.28
Chchd1Q9CQA6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Chchd1Q9CQA6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chchd1Q9CQA6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chchd1Q9CQA6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms