Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdh15Q99PJ1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdh15Q99PJ1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdh15Q99PJ1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdh15Q99PJ1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdh15Q99PJ1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdh15Q99PJ1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdh15Q99PJ1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC26.4■■□□□ 1.82
Pcdh15Q99PJ1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdh15Q99PJ1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.4■■□□□ 1.82
Pcdh15Q99PJ1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pcdh15Q99PJ1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Pcdh15Q99PJ1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC26.39■■□□□ 1.82
Pcdh15Q99PJ1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Pcdh15Q99PJ1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
Pcdh15Q99PJ1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdh15Q99PJ1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.38■■□□□ 1.81
Pcdh15Q99PJ1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdh15Q99PJ1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC26.37■■□□□ 1.81
Pcdh15Q99PJ1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdh15Q99PJ1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdh15Q99PJ1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Pcdh15Q99PJ1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC26.36■■□□□ 1.81
Pcdh15Q99PJ1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdh15Q99PJ1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdh15Q99PJ1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC26.35■■□□□ 1.81
Pcdh15Q99PJ1 Gm5131-201ENSMUST00000212776 1238 ntBASIC26.35■■□□□ 1.81
Pcdh15Q99PJ1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
Pcdh15Q99PJ1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Pcdh15Q99PJ1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
Pcdh15Q99PJ1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdh15Q99PJ1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC26.35■■□□□ 1.81
Pcdh15Q99PJ1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdh15Q99PJ1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdh15Q99PJ1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Pcdh15Q99PJ1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdh15Q99PJ1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC26.33■■□□□ 1.81
Pcdh15Q99PJ1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Pcdh15Q99PJ1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Pcdh15Q99PJ1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdh15Q99PJ1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdh15Q99PJ1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdh15Q99PJ1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdh15Q99PJ1 Gm21956-201ENSMUST00000179946 522 ntBASIC26.3■■□□□ 1.8
Pcdh15Q99PJ1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Pcdh15Q99PJ1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdh15Q99PJ1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdh15Q99PJ1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdh15Q99PJ1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Pcdh15Q99PJ1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdh15Q99PJ1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdh15Q99PJ1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdh15Q99PJ1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Pcdh15Q99PJ1 Serp2-204ENSMUST00000228055 705 ntBASIC26.27■■□□□ 1.8
Pcdh15Q99PJ1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdh15Q99PJ1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Pcdh15Q99PJ1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC26.27■■□□□ 1.8
Pcdh15Q99PJ1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC26.27■■□□□ 1.8
Pcdh15Q99PJ1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdh15Q99PJ1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC26.26■■□□□ 1.79
Pcdh15Q99PJ1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC26.26■■□□□ 1.79
Pcdh15Q99PJ1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdh15Q99PJ1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.26■■□□□ 1.79
Pcdh15Q99PJ1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdh15Q99PJ1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdh15Q99PJ1 Etf1-202ENSMUST00000180351 108 ntBASIC26.26■■□□□ 1.79
Pcdh15Q99PJ1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC26.26■■□□□ 1.79
Pcdh15Q99PJ1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdh15Q99PJ1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdh15Q99PJ1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdh15Q99PJ1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdh15Q99PJ1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdh15Q99PJ1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdh15Q99PJ1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC26.24■■□□□ 1.79
Pcdh15Q99PJ1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdh15Q99PJ1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdh15Q99PJ1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdh15Q99PJ1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Pcdh15Q99PJ1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdh15Q99PJ1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdh15Q99PJ1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdh15Q99PJ1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdh15Q99PJ1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdh15Q99PJ1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdh15Q99PJ1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdh15Q99PJ1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdh15Q99PJ1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdh15Q99PJ1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdh15Q99PJ1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdh15Q99PJ1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdh15Q99PJ1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.19■■□□□ 1.78
Pcdh15Q99PJ1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdh15Q99PJ1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Pcdh15Q99PJ1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
Pcdh15Q99PJ1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdh15Q99PJ1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdh15Q99PJ1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdh15Q99PJ1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdh15Q99PJ1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdh15Q99PJ1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms