Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp1aQ921W0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp1aQ921W0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp1aQ921W0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp1aQ921W0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp1aQ921W0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Chmp1aQ921W0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp1aQ921W0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp1aQ921W0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp1aQ921W0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Chmp1aQ921W0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Chmp1aQ921W0 Gm45855-201ENSMUST00000212546 880 ntBASIC19.6■□□□□ 0.73
Chmp1aQ921W0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp1aQ921W0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp1aQ921W0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Chmp1aQ921W0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp1aQ921W0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp1aQ921W0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp1aQ921W0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp1aQ921W0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp1aQ921W0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp1aQ921W0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.57■□□□□ 0.72
Chmp1aQ921W0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp1aQ921W0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp1aQ921W0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp1aQ921W0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp1aQ921W0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.56■□□□□ 0.72
Chmp1aQ921W0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp1aQ921W0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp1aQ921W0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp1aQ921W0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp1aQ921W0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Chmp1aQ921W0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp1aQ921W0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp1aQ921W0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Chmp1aQ921W0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp1aQ921W0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp1aQ921W0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp1aQ921W0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Chmp1aQ921W0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp1aQ921W0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp1aQ921W0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Chmp1aQ921W0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Chmp1aQ921W0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp1aQ921W0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.52■□□□□ 0.72
Chmp1aQ921W0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.52■□□□□ 0.72
Chmp1aQ921W0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp1aQ921W0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chmp1aQ921W0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp1aQ921W0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp1aQ921W0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp1aQ921W0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Chmp1aQ921W0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp1aQ921W0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Chmp1aQ921W0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Chmp1aQ921W0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Chmp1aQ921W0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp1aQ921W0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp1aQ921W0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp1aQ921W0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp1aQ921W0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp1aQ921W0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp1aQ921W0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp1aQ921W0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1aQ921W0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1aQ921W0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Chmp1aQ921W0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.48■□□□□ 0.71
Chmp1aQ921W0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1aQ921W0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1aQ921W0 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.48■□□□□ 0.71
Chmp1aQ921W0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp1aQ921W0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Chmp1aQ921W0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Chmp1aQ921W0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Chmp1aQ921W0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp1aQ921W0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp1aQ921W0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp1aQ921W0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.47■□□□□ 0.71
Chmp1aQ921W0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp1aQ921W0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp1aQ921W0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1aQ921W0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Chmp1aQ921W0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1aQ921W0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp1aQ921W0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1aQ921W0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1aQ921W0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.44■□□□□ 0.7
Chmp1aQ921W0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chmp1aQ921W0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.44■□□□□ 0.7
Chmp1aQ921W0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Chmp1aQ921W0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp1aQ921W0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Chmp1aQ921W0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1aQ921W0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1aQ921W0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Chmp1aQ921W0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1aQ921W0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1aQ921W0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1aQ921W0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp1aQ921W0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms