Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha9Q91Y11 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.84■■□□□ 1.41
Pcdha9Q91Y11 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha9Q91Y11 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha9Q91Y11 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha9Q91Y11 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha9Q91Y11 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.84■■□□□ 1.41
Pcdha9Q91Y11 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Pcdha9Q91Y11 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdha9Q91Y11 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.83■■□□□ 1.41
Pcdha9Q91Y11 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
Pcdha9Q91Y11 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha9Q91Y11 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha9Q91Y11 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.82■■□□□ 1.4
Pcdha9Q91Y11 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha9Q91Y11 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.8■■□□□ 1.4
Pcdha9Q91Y11 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha9Q91Y11 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha9Q91Y11 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha9Q91Y11 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Pcdha9Q91Y11 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha9Q91Y11 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Pcdha9Q91Y11 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.78■■□□□ 1.4
Pcdha9Q91Y11 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.78■■□□□ 1.4
Pcdha9Q91Y11 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha9Q91Y11 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Pcdha9Q91Y11 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Pcdha9Q91Y11 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdha9Q91Y11 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha9Q91Y11 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha9Q91Y11 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha9Q91Y11 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdha9Q91Y11 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.74■■□□□ 1.39
Pcdha9Q91Y11 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdha9Q91Y11 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.74■■□□□ 1.39
Pcdha9Q91Y11 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdha9Q91Y11 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.73■■□□□ 1.39
Pcdha9Q91Y11 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdha9Q91Y11 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdha9Q91Y11 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdha9Q91Y11 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
Pcdha9Q91Y11 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha9Q91Y11 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Pcdha9Q91Y11 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.71■■□□□ 1.39
Pcdha9Q91Y11 Gm27502-201ENSMUST00000183495 199 ntBASIC23.71■■□□□ 1.39
Pcdha9Q91Y11 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha9Q91Y11 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha9Q91Y11 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Pcdha9Q91Y11 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.7■■□□□ 1.38
Pcdha9Q91Y11 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.7■■□□□ 1.38
Pcdha9Q91Y11 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdha9Q91Y11 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdha9Q91Y11 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdha9Q91Y11 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdha9Q91Y11 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.69■■□□□ 1.38
Pcdha9Q91Y11 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdha9Q91Y11 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdha9Q91Y11 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Pcdha9Q91Y11 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdha9Q91Y11 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdha9Q91Y11 Gm14523-201ENSMUST00000117260 558 ntBASIC23.68■■□□□ 1.38
Pcdha9Q91Y11 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdha9Q91Y11 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdha9Q91Y11 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.68■■□□□ 1.38
Pcdha9Q91Y11 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdha9Q91Y11 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdha9Q91Y11 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdha9Q91Y11 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdha9Q91Y11 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdha9Q91Y11 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdha9Q91Y11 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pcdha9Q91Y11 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha9Q91Y11 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.66■■□□□ 1.38
Pcdha9Q91Y11 Gm12366-201ENSMUST00000121722 873 ntBASIC23.66■■□□□ 1.38
Pcdha9Q91Y11 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.66■■□□□ 1.38
Pcdha9Q91Y11 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.66■■□□□ 1.38
Pcdha9Q91Y11 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.66■■□□□ 1.38
Pcdha9Q91Y11 Gm5786-201ENSMUST00000085368 882 ntBASIC23.66■■□□□ 1.38
Pcdha9Q91Y11 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha9Q91Y11 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha9Q91Y11 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Pcdha9Q91Y11 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha9Q91Y11 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha9Q91Y11 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha9Q91Y11 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Pcdha9Q91Y11 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha9Q91Y11 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.65■■□□□ 1.38
Pcdha9Q91Y11 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdha9Q91Y11 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdha9Q91Y11 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Pcdha9Q91Y11 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdha9Q91Y11 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdha9Q91Y11 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.63■■□□□ 1.37
Pcdha9Q91Y11 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdha9Q91Y11 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdha9Q91Y11 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdha9Q91Y11 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdha9Q91Y11 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Pcdha9Q91Y11 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdha9Q91Y11 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms