Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Pcdhb20Q91XZ9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb20Q91XZ9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.39■■□□□ 1.02
Pcdhb20Q91XZ9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb20Q91XZ9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhb20Q91XZ9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb20Q91XZ9 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.39■■□□□ 1.01
Pcdhb20Q91XZ9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Pcdhb20Q91XZ9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb20Q91XZ9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Pcdhb20Q91XZ9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb20Q91XZ9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb20Q91XZ9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Pcdhb20Q91XZ9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb20Q91XZ9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb20Q91XZ9 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhb20Q91XZ9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pcdhb20Q91XZ9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.37■■□□□ 1.01
Pcdhb20Q91XZ9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb20Q91XZ9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb20Q91XZ9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.37■■□□□ 1.01
Pcdhb20Q91XZ9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb20Q91XZ9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhb20Q91XZ9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhb20Q91XZ9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb20Q91XZ9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb20Q91XZ9 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.36■■□□□ 1.01
Pcdhb20Q91XZ9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb20Q91XZ9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb20Q91XZ9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb20Q91XZ9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb20Q91XZ9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb20Q91XZ9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb20Q91XZ9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb20Q91XZ9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb20Q91XZ9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.35■■□□□ 1.01
Pcdhb20Q91XZ9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb20Q91XZ9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Pcdhb20Q91XZ9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb20Q91XZ9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb20Q91XZ9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb20Q91XZ9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.33■■□□□ 1.01
Pcdhb20Q91XZ9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb20Q91XZ9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb20Q91XZ9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb20Q91XZ9 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.33■■□□□ 1
Pcdhb20Q91XZ9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb20Q91XZ9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb20Q91XZ9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb20Q91XZ9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.32■■□□□ 1
Pcdhb20Q91XZ9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdhb20Q91XZ9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb20Q91XZ9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb20Q91XZ9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb20Q91XZ9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb20Q91XZ9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pcdhb20Q91XZ9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb20Q91XZ9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb20Q91XZ9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb20Q91XZ9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb20Q91XZ9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb20Q91XZ9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb20Q91XZ9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdhb20Q91XZ9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb20Q91XZ9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcdhb20Q91XZ9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb20Q91XZ9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb20Q91XZ9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb20Q91XZ9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb20Q91XZ9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb20Q91XZ9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb20Q91XZ9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb20Q91XZ9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb20Q91XZ9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb20Q91XZ9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhb20Q91XZ9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb20Q91XZ9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.26■□□□□ 0.99
Pcdhb20Q91XZ9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb20Q91XZ9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhb20Q91XZ9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb20Q91XZ9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb20Q91XZ9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb20Q91XZ9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.25■□□□□ 0.99
Pcdhb20Q91XZ9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pcdhb20Q91XZ9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb20Q91XZ9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb20Q91XZ9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb20Q91XZ9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb20Q91XZ9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb20Q91XZ9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb20Q91XZ9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb20Q91XZ9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb20Q91XZ9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb20Q91XZ9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb20Q91XZ9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb20Q91XZ9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb20Q91XZ9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Pcdhb20Q91XZ9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb20Q91XZ9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Pcdhb20Q91XZ9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms