Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.98■■□□□ 1.43
TraipQ8VIG6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.98■■□□□ 1.43
TraipQ8VIG6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TraipQ8VIG6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
TraipQ8VIG6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
TraipQ8VIG6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TraipQ8VIG6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TraipQ8VIG6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
TraipQ8VIG6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TraipQ8VIG6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
TraipQ8VIG6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TraipQ8VIG6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
TraipQ8VIG6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TraipQ8VIG6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
TraipQ8VIG6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TraipQ8VIG6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.95■■□□□ 1.42
TraipQ8VIG6 Gm43566-201ENSMUST00000196851 808 ntBASIC23.95■■□□□ 1.42
TraipQ8VIG6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TraipQ8VIG6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.94■■□□□ 1.42
TraipQ8VIG6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TraipQ8VIG6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TraipQ8VIG6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
TraipQ8VIG6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TraipQ8VIG6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TraipQ8VIG6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.93■■□□□ 1.42
TraipQ8VIG6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.93■■□□□ 1.42
TraipQ8VIG6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TraipQ8VIG6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TraipQ8VIG6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
TraipQ8VIG6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TraipQ8VIG6 Gm45444-201ENSMUST00000211394 898 ntBASIC23.92■■□□□ 1.42
TraipQ8VIG6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TraipQ8VIG6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
TraipQ8VIG6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TraipQ8VIG6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
TraipQ8VIG6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
TraipQ8VIG6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.91■■□□□ 1.42
TraipQ8VIG6 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.91■■□□□ 1.42
TraipQ8VIG6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TraipQ8VIG6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
TraipQ8VIG6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TraipQ8VIG6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TraipQ8VIG6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
TraipQ8VIG6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TraipQ8VIG6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TraipQ8VIG6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.9■■□□□ 1.42
TraipQ8VIG6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TraipQ8VIG6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TraipQ8VIG6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TraipQ8VIG6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TraipQ8VIG6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.89■■□□□ 1.41
TraipQ8VIG6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
TraipQ8VIG6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TraipQ8VIG6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
TraipQ8VIG6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TraipQ8VIG6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TraipQ8VIG6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TraipQ8VIG6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.88■■□□□ 1.41
TraipQ8VIG6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TraipQ8VIG6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TraipQ8VIG6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TraipQ8VIG6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
TraipQ8VIG6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TraipQ8VIG6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TraipQ8VIG6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
TraipQ8VIG6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TraipQ8VIG6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TraipQ8VIG6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TraipQ8VIG6 Gm13238-201ENSMUST00000117655 780 ntBASIC23.84■■□□□ 1.41
TraipQ8VIG6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
TraipQ8VIG6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TraipQ8VIG6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TraipQ8VIG6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
TraipQ8VIG6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TraipQ8VIG6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TraipQ8VIG6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TraipQ8VIG6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TraipQ8VIG6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
TraipQ8VIG6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TraipQ8VIG6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
TraipQ8VIG6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.81■■□□□ 1.4
TraipQ8VIG6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TraipQ8VIG6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TraipQ8VIG6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.81■■□□□ 1.4
TraipQ8VIG6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TraipQ8VIG6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TraipQ8VIG6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TraipQ8VIG6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TraipQ8VIG6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.8■■□□□ 1.4
TraipQ8VIG6 Gm15546-201ENSMUST00000122095 826 ntBASIC23.8■■□□□ 1.4
TraipQ8VIG6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.8■■□□□ 1.4
TraipQ8VIG6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TraipQ8VIG6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TraipQ8VIG6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TraipQ8VIG6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.79■■□□□ 1.4
TraipQ8VIG6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
TraipQ8VIG6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
TraipQ8VIG6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TraipQ8VIG6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TraipQ8VIG6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms