Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShfQ8CG80 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ShfQ8CG80 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ShfQ8CG80 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ShfQ8CG80 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.9■□□□□ 0.78
ShfQ8CG80 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ShfQ8CG80 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShfQ8CG80 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ShfQ8CG80 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.9■□□□□ 0.78
ShfQ8CG80 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShfQ8CG80 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ShfQ8CG80 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.89■□□□□ 0.77
ShfQ8CG80 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ShfQ8CG80 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ShfQ8CG80 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ShfQ8CG80 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ShfQ8CG80 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShfQ8CG80 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShfQ8CG80 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.88■□□□□ 0.77
ShfQ8CG80 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShfQ8CG80 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.88■□□□□ 0.77
ShfQ8CG80 Gm9812-201ENSMUST00000061934 968 ntBASIC19.88■□□□□ 0.77
ShfQ8CG80 Gm4799-201ENSMUST00000095396 657 ntBASIC19.88■□□□□ 0.77
ShfQ8CG80 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShfQ8CG80 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ShfQ8CG80 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.87■□□□□ 0.77
ShfQ8CG80 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.87■□□□□ 0.77
ShfQ8CG80 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ShfQ8CG80 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ShfQ8CG80 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShfQ8CG80 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ShfQ8CG80 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ShfQ8CG80 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.86■□□□□ 0.77
ShfQ8CG80 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.86■□□□□ 0.77
ShfQ8CG80 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ShfQ8CG80 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShfQ8CG80 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShfQ8CG80 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ShfQ8CG80 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.85■□□□□ 0.77
ShfQ8CG80 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ShfQ8CG80 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.85■□□□□ 0.77
ShfQ8CG80 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ShfQ8CG80 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ShfQ8CG80 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ShfQ8CG80 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ShfQ8CG80 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.84■□□□□ 0.77
ShfQ8CG80 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ShfQ8CG80 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ShfQ8CG80 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ShfQ8CG80 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.83■□□□□ 0.77
ShfQ8CG80 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.83■□□□□ 0.77
ShfQ8CG80 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
ShfQ8CG80 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.83■□□□□ 0.76
ShfQ8CG80 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ShfQ8CG80 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ShfQ8CG80 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ShfQ8CG80 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ShfQ8CG80 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ShfQ8CG80 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ShfQ8CG80 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ShfQ8CG80 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.81■□□□□ 0.76
ShfQ8CG80 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ShfQ8CG80 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.81■□□□□ 0.76
ShfQ8CG80 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
ShfQ8CG80 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ShfQ8CG80 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ShfQ8CG80 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShfQ8CG80 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShfQ8CG80 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ShfQ8CG80 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShfQ8CG80 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShfQ8CG80 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShfQ8CG80 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShfQ8CG80 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ShfQ8CG80 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ShfQ8CG80 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ShfQ8CG80 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ShfQ8CG80 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ShfQ8CG80 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ShfQ8CG80 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.78■□□□□ 0.76
ShfQ8CG80 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ShfQ8CG80 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ShfQ8CG80 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ShfQ8CG80 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ShfQ8CG80 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ShfQ8CG80 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.78■□□□□ 0.76
ShfQ8CG80 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ShfQ8CG80 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ShfQ8CG80 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ShfQ8CG80 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.77■□□□□ 0.76
ShfQ8CG80 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ShfQ8CG80 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ShfQ8CG80 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ShfQ8CG80 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ShfQ8CG80 Mir3960-201ENSMUST00000198213 73 ntBASIC19.77■□□□□ 0.76
ShfQ8CG80 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.77■□□□□ 0.76
ShfQ8CG80 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ShfQ8CG80 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.77■□□□□ 0.76
ShfQ8CG80 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ShfQ8CG80 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms