Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.69■□□□□ 0.74
Rft1Q8C3B8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rft1Q8C3B8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rft1Q8C3B8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rft1Q8C3B8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rft1Q8C3B8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rft1Q8C3B8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rft1Q8C3B8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rft1Q8C3B8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rft1Q8C3B8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rft1Q8C3B8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rft1Q8C3B8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rft1Q8C3B8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rft1Q8C3B8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rft1Q8C3B8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rft1Q8C3B8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rft1Q8C3B8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rft1Q8C3B8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rft1Q8C3B8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rft1Q8C3B8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.67■□□□□ 0.74
Rft1Q8C3B8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rft1Q8C3B8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rft1Q8C3B8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rft1Q8C3B8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rft1Q8C3B8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rft1Q8C3B8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rft1Q8C3B8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rft1Q8C3B8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.65■□□□□ 0.74
Rft1Q8C3B8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rft1Q8C3B8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rft1Q8C3B8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rft1Q8C3B8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rft1Q8C3B8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Rft1Q8C3B8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rft1Q8C3B8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rft1Q8C3B8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rft1Q8C3B8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rft1Q8C3B8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rft1Q8C3B8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rft1Q8C3B8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rft1Q8C3B8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rft1Q8C3B8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Rft1Q8C3B8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rft1Q8C3B8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rft1Q8C3B8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rft1Q8C3B8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rft1Q8C3B8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rft1Q8C3B8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rft1Q8C3B8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.61■□□□□ 0.73
Rft1Q8C3B8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rft1Q8C3B8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rft1Q8C3B8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rft1Q8C3B8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.6■□□□□ 0.73
Rft1Q8C3B8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rft1Q8C3B8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rft1Q8C3B8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rft1Q8C3B8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rft1Q8C3B8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rft1Q8C3B8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rft1Q8C3B8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rft1Q8C3B8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rft1Q8C3B8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rft1Q8C3B8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rft1Q8C3B8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Rft1Q8C3B8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rft1Q8C3B8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.58■□□□□ 0.72
Rft1Q8C3B8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rft1Q8C3B8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rft1Q8C3B8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rft1Q8C3B8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rft1Q8C3B8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rft1Q8C3B8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rft1Q8C3B8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rft1Q8C3B8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rft1Q8C3B8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rft1Q8C3B8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Rft1Q8C3B8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rft1Q8C3B8 Gm37136-201ENSMUST00000194368 194 ntBASIC19.55■□□□□ 0.72
Rft1Q8C3B8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rft1Q8C3B8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rft1Q8C3B8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rft1Q8C3B8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rft1Q8C3B8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Rft1Q8C3B8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rft1Q8C3B8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rft1Q8C3B8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rft1Q8C3B8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rft1Q8C3B8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rft1Q8C3B8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rft1Q8C3B8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rft1Q8C3B8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Rft1Q8C3B8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.52■□□□□ 0.72
Rft1Q8C3B8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rft1Q8C3B8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Rft1Q8C3B8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rft1Q8C3B8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rft1Q8C3B8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rft1Q8C3B8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.51■□□□□ 0.71
Rft1Q8C3B8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rft1Q8C3B8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms