Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps9d1Q8C190 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vps9d1Q8C190 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Vps9d1Q8C190 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Vps9d1Q8C190 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Vps9d1Q8C190 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps9d1Q8C190 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vps9d1Q8C190 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps9d1Q8C190 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Vps9d1Q8C190 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps9d1Q8C190 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps9d1Q8C190 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps9d1Q8C190 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps9d1Q8C190 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Vps9d1Q8C190 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps9d1Q8C190 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps9d1Q8C190 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps9d1Q8C190 Gm7432-201ENSMUST00000210343 879 ntBASIC20.72■□□□□ 0.91
Vps9d1Q8C190 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vps9d1Q8C190 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps9d1Q8C190 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps9d1Q8C190 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps9d1Q8C190 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
Vps9d1Q8C190 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps9d1Q8C190 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps9d1Q8C190 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps9d1Q8C190 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps9d1Q8C190 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps9d1Q8C190 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps9d1Q8C190 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps9d1Q8C190 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.69■□□□□ 0.9
Vps9d1Q8C190 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.69■□□□□ 0.9
Vps9d1Q8C190 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps9d1Q8C190 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps9d1Q8C190 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps9d1Q8C190 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.68■□□□□ 0.9
Vps9d1Q8C190 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps9d1Q8C190 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps9d1Q8C190 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps9d1Q8C190 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps9d1Q8C190 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps9d1Q8C190 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.67■□□□□ 0.9
Vps9d1Q8C190 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps9d1Q8C190 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps9d1Q8C190 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps9d1Q8C190 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps9d1Q8C190 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Vps9d1Q8C190 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps9d1Q8C190 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps9d1Q8C190 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps9d1Q8C190 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Vps9d1Q8C190 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Vps9d1Q8C190 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.65■□□□□ 0.9
Vps9d1Q8C190 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps9d1Q8C190 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vps9d1Q8C190 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Vps9d1Q8C190 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vps9d1Q8C190 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Vps9d1Q8C190 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps9d1Q8C190 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Vps9d1Q8C190 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps9d1Q8C190 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps9d1Q8C190 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps9d1Q8C190 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps9d1Q8C190 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps9d1Q8C190 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps9d1Q8C190 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps9d1Q8C190 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.63■□□□□ 0.89
Vps9d1Q8C190 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps9d1Q8C190 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps9d1Q8C190 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps9d1Q8C190 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps9d1Q8C190 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps9d1Q8C190 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps9d1Q8C190 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
Vps9d1Q8C190 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Vps9d1Q8C190 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps9d1Q8C190 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vps9d1Q8C190 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps9d1Q8C190 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.61■□□□□ 0.89
Vps9d1Q8C190 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Vps9d1Q8C190 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.61■□□□□ 0.89
Vps9d1Q8C190 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vps9d1Q8C190 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Vps9d1Q8C190 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps9d1Q8C190 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps9d1Q8C190 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vps9d1Q8C190 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps9d1Q8C190 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps9d1Q8C190 Gm11599-201ENSMUST00000118720 878 ntBASIC20.59■□□□□ 0.89
Vps9d1Q8C190 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.59■□□□□ 0.89
Vps9d1Q8C190 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps9d1Q8C190 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps9d1Q8C190 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps9d1Q8C190 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.58■□□□□ 0.89
Vps9d1Q8C190 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.58■□□□□ 0.88
Vps9d1Q8C190 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.57■□□□□ 0.88
Vps9d1Q8C190 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps9d1Q8C190 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps9d1Q8C190 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms