Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Nhlrc1Q8BR37 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nhlrc1Q8BR37 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhlrc1Q8BR37 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nhlrc1Q8BR37 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nhlrc1Q8BR37 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nhlrc1Q8BR37 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nhlrc1Q8BR37 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Nhlrc1Q8BR37 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nhlrc1Q8BR37 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nhlrc1Q8BR37 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nhlrc1Q8BR37 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.18■□□□□ 0.34
Nhlrc1Q8BR37 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nhlrc1Q8BR37 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nhlrc1Q8BR37 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhlrc1Q8BR37 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.18■□□□□ 0.34
Nhlrc1Q8BR37 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nhlrc1Q8BR37 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nhlrc1Q8BR37 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nhlrc1Q8BR37 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nhlrc1Q8BR37 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.17■□□□□ 0.34
Nhlrc1Q8BR37 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.17■□□□□ 0.34
Nhlrc1Q8BR37 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nhlrc1Q8BR37 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nhlrc1Q8BR37 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Nhlrc1Q8BR37 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhlrc1Q8BR37 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.16■□□□□ 0.34
Nhlrc1Q8BR37 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhlrc1Q8BR37 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nhlrc1Q8BR37 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhlrc1Q8BR37 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nhlrc1Q8BR37 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nhlrc1Q8BR37 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nhlrc1Q8BR37 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nhlrc1Q8BR37 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nhlrc1Q8BR37 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nhlrc1Q8BR37 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nhlrc1Q8BR37 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nhlrc1Q8BR37 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nhlrc1Q8BR37 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nhlrc1Q8BR37 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nhlrc1Q8BR37 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.13■□□□□ 0.33
Nhlrc1Q8BR37 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nhlrc1Q8BR37 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nhlrc1Q8BR37 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhlrc1Q8BR37 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.13■□□□□ 0.33
Nhlrc1Q8BR37 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nhlrc1Q8BR37 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhlrc1Q8BR37 Gm15546-201ENSMUST00000122095 826 ntBASIC17.11■□□□□ 0.33
Nhlrc1Q8BR37 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.11■□□□□ 0.33
Nhlrc1Q8BR37 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhlrc1Q8BR37 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhlrc1Q8BR37 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nhlrc1Q8BR37 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.1■□□□□ 0.33
Nhlrc1Q8BR37 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nhlrc1Q8BR37 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhlrc1Q8BR37 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nhlrc1Q8BR37 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Nhlrc1Q8BR37 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nhlrc1Q8BR37 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhlrc1Q8BR37 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nhlrc1Q8BR37 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.09■□□□□ 0.33
Nhlrc1Q8BR37 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nhlrc1Q8BR37 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.09■□□□□ 0.33
Nhlrc1Q8BR37 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nhlrc1Q8BR37 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhlrc1Q8BR37 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nhlrc1Q8BR37 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nhlrc1Q8BR37 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nhlrc1Q8BR37 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nhlrc1Q8BR37 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nhlrc1Q8BR37 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nhlrc1Q8BR37 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nhlrc1Q8BR37 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.08■□□□□ 0.32
Nhlrc1Q8BR37 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nhlrc1Q8BR37 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nhlrc1Q8BR37 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Nhlrc1Q8BR37 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nhlrc1Q8BR37 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nhlrc1Q8BR37 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nhlrc1Q8BR37 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nhlrc1Q8BR37 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nhlrc1Q8BR37 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nhlrc1Q8BR37 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.06■□□□□ 0.32
Nhlrc1Q8BR37 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Nhlrc1Q8BR37 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nhlrc1Q8BR37 Gm43566-201ENSMUST00000196851 808 ntBASIC17.06■□□□□ 0.32
Nhlrc1Q8BR37 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nhlrc1Q8BR37 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nhlrc1Q8BR37 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nhlrc1Q8BR37 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nhlrc1Q8BR37 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Nhlrc1Q8BR37 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.05■□□□□ 0.32
Nhlrc1Q8BR37 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nhlrc1Q8BR37 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nhlrc1Q8BR37 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nhlrc1Q8BR37 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nhlrc1Q8BR37 Gm45444-201ENSMUST00000211394 898 ntBASIC17.04■□□□□ 0.32
Nhlrc1Q8BR37 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nhlrc1Q8BR37 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms