Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Sfr1Q8BP27 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sfr1Q8BP27 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sfr1Q8BP27 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.52■■□□□ 1.2
Sfr1Q8BP27 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sfr1Q8BP27 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Sfr1Q8BP27 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sfr1Q8BP27 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sfr1Q8BP27 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sfr1Q8BP27 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.51■■□□□ 1.19
Sfr1Q8BP27 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.51■■□□□ 1.19
Sfr1Q8BP27 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sfr1Q8BP27 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sfr1Q8BP27 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Sfr1Q8BP27 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Sfr1Q8BP27 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.5■■□□□ 1.19
Sfr1Q8BP27 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.5■■□□□ 1.19
Sfr1Q8BP27 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Sfr1Q8BP27 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sfr1Q8BP27 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.49■■□□□ 1.19
Sfr1Q8BP27 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Sfr1Q8BP27 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.49■■□□□ 1.19
Sfr1Q8BP27 Gm12366-201ENSMUST00000121722 873 ntBASIC22.49■■□□□ 1.19
Sfr1Q8BP27 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.49■■□□□ 1.19
Sfr1Q8BP27 Gm27502-201ENSMUST00000183495 199 ntBASIC22.49■■□□□ 1.19
Sfr1Q8BP27 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.49■■□□□ 1.19
Sfr1Q8BP27 Gm5786-201ENSMUST00000085368 882 ntBASIC22.49■■□□□ 1.19
Sfr1Q8BP27 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sfr1Q8BP27 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sfr1Q8BP27 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sfr1Q8BP27 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.48■■□□□ 1.19
Sfr1Q8BP27 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sfr1Q8BP27 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sfr1Q8BP27 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Sfr1Q8BP27 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Sfr1Q8BP27 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sfr1Q8BP27 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Sfr1Q8BP27 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sfr1Q8BP27 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sfr1Q8BP27 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sfr1Q8BP27 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sfr1Q8BP27 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.47■■□□□ 1.19
Sfr1Q8BP27 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sfr1Q8BP27 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.46■■□□□ 1.19
Sfr1Q8BP27 Gm14523-201ENSMUST00000117260 558 ntBASIC22.46■■□□□ 1.19
Sfr1Q8BP27 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sfr1Q8BP27 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sfr1Q8BP27 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sfr1Q8BP27 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sfr1Q8BP27 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sfr1Q8BP27 Cap2-205ENSMUST00000225824 1634 ntBASIC22.46■■□□□ 1.19
Sfr1Q8BP27 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Sfr1Q8BP27 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sfr1Q8BP27 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.45■■□□□ 1.18
Sfr1Q8BP27 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sfr1Q8BP27 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sfr1Q8BP27 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sfr1Q8BP27 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sfr1Q8BP27 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.44■■□□□ 1.18
Sfr1Q8BP27 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sfr1Q8BP27 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Sfr1Q8BP27 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Sfr1Q8BP27 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Sfr1Q8BP27 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Sfr1Q8BP27 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sfr1Q8BP27 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sfr1Q8BP27 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sfr1Q8BP27 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sfr1Q8BP27 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sfr1Q8BP27 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sfr1Q8BP27 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sfr1Q8BP27 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Sfr1Q8BP27 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.43■■□□□ 1.18
Sfr1Q8BP27 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sfr1Q8BP27 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Sfr1Q8BP27 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Sfr1Q8BP27 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sfr1Q8BP27 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sfr1Q8BP27 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sfr1Q8BP27 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sfr1Q8BP27 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.42■■□□□ 1.18
Sfr1Q8BP27 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sfr1Q8BP27 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.42■■□□□ 1.18
Sfr1Q8BP27 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sfr1Q8BP27 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sfr1Q8BP27 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.42■■□□□ 1.18
Sfr1Q8BP27 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.41■■□□□ 1.18
Sfr1Q8BP27 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sfr1Q8BP27 Gm7332-201ENSMUST00000118351 454 ntBASIC22.4■■□□□ 1.18
Sfr1Q8BP27 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.4■■□□□ 1.18
Sfr1Q8BP27 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sfr1Q8BP27 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sfr1Q8BP27 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sfr1Q8BP27 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sfr1Q8BP27 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
Sfr1Q8BP27 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.4■■□□□ 1.18
Sfr1Q8BP27 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sfr1Q8BP27 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sfr1Q8BP27 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Sfr1Q8BP27 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms