Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.97■□□□□ 0.95
Ckap4Q8BMK4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ckap4Q8BMK4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ckap4Q8BMK4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ckap4Q8BMK4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ckap4Q8BMK4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ckap4Q8BMK4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ckap4Q8BMK4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Ckap4Q8BMK4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
Ckap4Q8BMK4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap4Q8BMK4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap4Q8BMK4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap4Q8BMK4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap4Q8BMK4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap4Q8BMK4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.95■□□□□ 0.94
Ckap4Q8BMK4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ckap4Q8BMK4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ckap4Q8BMK4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.94■□□□□ 0.94
Ckap4Q8BMK4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ckap4Q8BMK4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ckap4Q8BMK4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ckap4Q8BMK4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ckap4Q8BMK4 Gm11599-201ENSMUST00000118720 878 ntBASIC20.93■□□□□ 0.94
Ckap4Q8BMK4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ckap4Q8BMK4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ckap4Q8BMK4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ckap4Q8BMK4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ckap4Q8BMK4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ckap4Q8BMK4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ckap4Q8BMK4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ckap4Q8BMK4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ckap4Q8BMK4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ckap4Q8BMK4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ckap4Q8BMK4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ckap4Q8BMK4 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.9■□□□□ 0.94
Ckap4Q8BMK4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.9■□□□□ 0.94
Ckap4Q8BMK4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ckap4Q8BMK4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ckap4Q8BMK4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.9■□□□□ 0.94
Ckap4Q8BMK4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.9■□□□□ 0.94
Ckap4Q8BMK4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ckap4Q8BMK4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ckap4Q8BMK4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ckap4Q8BMK4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap4Q8BMK4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap4Q8BMK4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
Ckap4Q8BMK4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ckap4Q8BMK4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap4Q8BMK4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ckap4Q8BMK4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap4Q8BMK4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap4Q8BMK4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ckap4Q8BMK4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ckap4Q8BMK4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ckap4Q8BMK4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ckap4Q8BMK4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ckap4Q8BMK4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ckap4Q8BMK4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ckap4Q8BMK4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ckap4Q8BMK4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ckap4Q8BMK4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ckap4Q8BMK4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ckap4Q8BMK4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ckap4Q8BMK4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ckap4Q8BMK4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ckap4Q8BMK4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ckap4Q8BMK4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ckap4Q8BMK4 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.84■□□□□ 0.93
Ckap4Q8BMK4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ckap4Q8BMK4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ckap4Q8BMK4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ckap4Q8BMK4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.84■□□□□ 0.93
Ckap4Q8BMK4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ckap4Q8BMK4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ckap4Q8BMK4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Ckap4Q8BMK4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ckap4Q8BMK4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ckap4Q8BMK4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ckap4Q8BMK4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
Ckap4Q8BMK4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ckap4Q8BMK4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.82■□□□□ 0.92
Ckap4Q8BMK4 Gm4799-201ENSMUST00000095396 657 ntBASIC20.82■□□□□ 0.92
Ckap4Q8BMK4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ckap4Q8BMK4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ckap4Q8BMK4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ckap4Q8BMK4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms