Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh19Q80TF3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
Pcdh19Q80TF3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh19Q80TF3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh19Q80TF3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Pcdh19Q80TF3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Pcdh19Q80TF3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh19Q80TF3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh19Q80TF3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdh19Q80TF3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdh19Q80TF3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdh19Q80TF3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Pcdh19Q80TF3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdh19Q80TF3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdh19Q80TF3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdh19Q80TF3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Pcdh19Q80TF3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.89■■□□□ 1.09
Pcdh19Q80TF3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.89■■□□□ 1.09
Pcdh19Q80TF3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh19Q80TF3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh19Q80TF3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh19Q80TF3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh19Q80TF3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh19Q80TF3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcdh19Q80TF3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
Pcdh19Q80TF3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh19Q80TF3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh19Q80TF3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh19Q80TF3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh19Q80TF3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Pcdh19Q80TF3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh19Q80TF3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh19Q80TF3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Pcdh19Q80TF3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh19Q80TF3 Gm5921-201ENSMUST00000075898 882 ntBASIC21.86■■□□□ 1.09
Pcdh19Q80TF3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Pcdh19Q80TF3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Pcdh19Q80TF3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh19Q80TF3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh19Q80TF3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh19Q80TF3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh19Q80TF3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh19Q80TF3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.84■■□□□ 1.09
Pcdh19Q80TF3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh19Q80TF3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Pcdh19Q80TF3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.83■■□□□ 1.09
Pcdh19Q80TF3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh19Q80TF3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh19Q80TF3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh19Q80TF3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh19Q80TF3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.83■■□□□ 1.08
Pcdh19Q80TF3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.83■■□□□ 1.08
Pcdh19Q80TF3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdh19Q80TF3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh19Q80TF3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Pcdh19Q80TF3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh19Q80TF3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh19Q80TF3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdh19Q80TF3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.81■■□□□ 1.08
Pcdh19Q80TF3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdh19Q80TF3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.81■■□□□ 1.08
Pcdh19Q80TF3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdh19Q80TF3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh19Q80TF3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdh19Q80TF3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh19Q80TF3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh19Q80TF3 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.8■■□□□ 1.08
Pcdh19Q80TF3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Pcdh19Q80TF3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdh19Q80TF3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh19Q80TF3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh19Q80TF3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh19Q80TF3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh19Q80TF3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh19Q80TF3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh19Q80TF3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh19Q80TF3 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.77■■□□□ 1.08
Pcdh19Q80TF3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.77■■□□□ 1.08
Pcdh19Q80TF3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdh19Q80TF3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdh19Q80TF3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pcdh19Q80TF3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh19Q80TF3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh19Q80TF3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh19Q80TF3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh19Q80TF3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh19Q80TF3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh19Q80TF3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh19Q80TF3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh19Q80TF3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh19Q80TF3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh19Q80TF3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh19Q80TF3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh19Q80TF3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh19Q80TF3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdh19Q80TF3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh19Q80TF3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcdh19Q80TF3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh19Q80TF3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh19Q80TF3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms