Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
ShprhQ7TPQ3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
ShprhQ7TPQ3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
ShprhQ7TPQ3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
ShprhQ7TPQ3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
ShprhQ7TPQ3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC32.75■■■□□ 2.83
ShprhQ7TPQ3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC32.75■■■□□ 2.83
ShprhQ7TPQ3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC32.74■■■□□ 2.83
ShprhQ7TPQ3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
ShprhQ7TPQ3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
ShprhQ7TPQ3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC32.73■■■□□ 2.83
ShprhQ7TPQ3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC32.73■■■□□ 2.83
ShprhQ7TPQ3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
ShprhQ7TPQ3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
ShprhQ7TPQ3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
ShprhQ7TPQ3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
ShprhQ7TPQ3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ShprhQ7TPQ3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
ShprhQ7TPQ3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
ShprhQ7TPQ3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC32.71■■■□□ 2.83
ShprhQ7TPQ3 Fezf2-202ENSMUST00000224023 1917 ntBASIC32.71■■■□□ 2.83
ShprhQ7TPQ3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC32.7■■■□□ 2.83
ShprhQ7TPQ3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.83
ShprhQ7TPQ3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC32.69■■■□□ 2.82
ShprhQ7TPQ3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
ShprhQ7TPQ3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC32.69■■■□□ 2.82
ShprhQ7TPQ3 Gm45102-201ENSMUST00000207427 857 ntBASIC32.69■■■□□ 2.82
ShprhQ7TPQ3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
ShprhQ7TPQ3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
ShprhQ7TPQ3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
ShprhQ7TPQ3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
ShprhQ7TPQ3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
ShprhQ7TPQ3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
ShprhQ7TPQ3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
ShprhQ7TPQ3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
ShprhQ7TPQ3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
ShprhQ7TPQ3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC32.67■■■□□ 2.82
ShprhQ7TPQ3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC32.66■■■□□ 2.82
ShprhQ7TPQ3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
ShprhQ7TPQ3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
ShprhQ7TPQ3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
ShprhQ7TPQ3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
ShprhQ7TPQ3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC32.66■■■□□ 2.82
ShprhQ7TPQ3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
ShprhQ7TPQ3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
ShprhQ7TPQ3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
ShprhQ7TPQ3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82
ShprhQ7TPQ3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
ShprhQ7TPQ3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.81
ShprhQ7TPQ3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
ShprhQ7TPQ3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
ShprhQ7TPQ3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
ShprhQ7TPQ3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC32.63■■■□□ 2.81
ShprhQ7TPQ3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
ShprhQ7TPQ3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
ShprhQ7TPQ3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC32.61■■■□□ 2.81
ShprhQ7TPQ3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
ShprhQ7TPQ3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
ShprhQ7TPQ3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
ShprhQ7TPQ3 Gm9959-201ENSMUST00000068277 390 ntBASIC32.59■■■□□ 2.81
ShprhQ7TPQ3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC32.59■■■□□ 2.81
ShprhQ7TPQ3 Gm7199-201ENSMUST00000118327 1485 ntBASIC32.59■■■□□ 2.81
ShprhQ7TPQ3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
ShprhQ7TPQ3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
ShprhQ7TPQ3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
ShprhQ7TPQ3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ShprhQ7TPQ3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
ShprhQ7TPQ3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ShprhQ7TPQ3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
ShprhQ7TPQ3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ShprhQ7TPQ3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
ShprhQ7TPQ3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
ShprhQ7TPQ3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC32.57■■■□□ 2.8
ShprhQ7TPQ3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
ShprhQ7TPQ3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
ShprhQ7TPQ3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC32.56■■■□□ 2.8
ShprhQ7TPQ3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC32.56■■■□□ 2.8
ShprhQ7TPQ3 Gm18755-201ENSMUST00000218030 1099 ntBASIC32.56■■■□□ 2.8
ShprhQ7TPQ3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
ShprhQ7TPQ3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
ShprhQ7TPQ3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC32.54■■■□□ 2.8
ShprhQ7TPQ3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
ShprhQ7TPQ3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
ShprhQ7TPQ3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC32.53■■■□□ 2.8
ShprhQ7TPQ3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
ShprhQ7TPQ3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
ShprhQ7TPQ3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
ShprhQ7TPQ3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
ShprhQ7TPQ3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
ShprhQ7TPQ3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
ShprhQ7TPQ3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.79
ShprhQ7TPQ3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.79
ShprhQ7TPQ3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
ShprhQ7TPQ3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
ShprhQ7TPQ3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
ShprhQ7TPQ3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
ShprhQ7TPQ3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC32.49■■■□□ 2.79
ShprhQ7TPQ3 Gm42501-201ENSMUST00000200220 1026 ntBASIC32.49■■■□□ 2.79
ShprhQ7TPQ3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC32.49■■■□□ 2.79
ShprhQ7TPQ3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC32.49■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms