Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.39■■□□□ 1.01
Rfx4Q7TNK1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rfx4Q7TNK1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Rfx4Q7TNK1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfx4Q7TNK1 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.38■■□□□ 1.01
Rfx4Q7TNK1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfx4Q7TNK1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.38■■□□□ 1.01
Rfx4Q7TNK1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.38■■□□□ 1.01
Rfx4Q7TNK1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfx4Q7TNK1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rfx4Q7TNK1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfx4Q7TNK1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.36■■□□□ 1.01
Rfx4Q7TNK1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rfx4Q7TNK1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Rfx4Q7TNK1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rfx4Q7TNK1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.36■■□□□ 1.01
Rfx4Q7TNK1 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.35■■□□□ 1.01
Rfx4Q7TNK1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rfx4Q7TNK1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfx4Q7TNK1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rfx4Q7TNK1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rfx4Q7TNK1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rfx4Q7TNK1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rfx4Q7TNK1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.33■■□□□ 1
Rfx4Q7TNK1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfx4Q7TNK1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rfx4Q7TNK1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rfx4Q7TNK1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Rfx4Q7TNK1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx4Q7TNK1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.31■■□□□ 1
Rfx4Q7TNK1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.31■■□□□ 1
Rfx4Q7TNK1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx4Q7TNK1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rfx4Q7TNK1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rfx4Q7TNK1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx4Q7TNK1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx4Q7TNK1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rfx4Q7TNK1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Rfx4Q7TNK1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.29■■□□□ 1
Rfx4Q7TNK1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfx4Q7TNK1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rfx4Q7TNK1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfx4Q7TNK1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rfx4Q7TNK1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfx4Q7TNK1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.29■■□□□ 1
Rfx4Q7TNK1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfx4Q7TNK1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rfx4Q7TNK1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rfx4Q7TNK1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rfx4Q7TNK1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.28■■□□□ 1
Rfx4Q7TNK1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rfx4Q7TNK1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Rfx4Q7TNK1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rfx4Q7TNK1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfx4Q7TNK1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfx4Q7TNK1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rfx4Q7TNK1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rfx4Q7TNK1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx4Q7TNK1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.25■□□□□ 0.99
Rfx4Q7TNK1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx4Q7TNK1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx4Q7TNK1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx4Q7TNK1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx4Q7TNK1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx4Q7TNK1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx4Q7TNK1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx4Q7TNK1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx4Q7TNK1 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.24■□□□□ 0.99
Rfx4Q7TNK1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx4Q7TNK1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx4Q7TNK1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx4Q7TNK1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.23■□□□□ 0.99
Rfx4Q7TNK1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx4Q7TNK1 Gm37136-201ENSMUST00000194368 194 ntBASIC21.23■□□□□ 0.99
Rfx4Q7TNK1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx4Q7TNK1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
Rfx4Q7TNK1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.23■□□□□ 0.99
Rfx4Q7TNK1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx4Q7TNK1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx4Q7TNK1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx4Q7TNK1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx4Q7TNK1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Rfx4Q7TNK1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Rfx4Q7TNK1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx4Q7TNK1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.21■□□□□ 0.99
Rfx4Q7TNK1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx4Q7TNK1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx4Q7TNK1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rfx4Q7TNK1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx4Q7TNK1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.2■□□□□ 0.98
Rfx4Q7TNK1 Gm45855-201ENSMUST00000212546 880 ntBASIC21.2■□□□□ 0.98
Rfx4Q7TNK1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx4Q7TNK1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx4Q7TNK1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx4Q7TNK1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx4Q7TNK1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx4Q7TNK1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx4Q7TNK1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx4Q7TNK1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx4Q7TNK1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms