Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim12Q78RX3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smim12Q78RX3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim12Q78RX3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smim12Q78RX3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smim12Q78RX3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smim12Q78RX3 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.69■□□□□ 0.58
Smim12Q78RX3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smim12Q78RX3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim12Q78RX3 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.69■□□□□ 0.58
Smim12Q78RX3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smim12Q78RX3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.69■□□□□ 0.58
Smim12Q78RX3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Smim12Q78RX3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.69■□□□□ 0.58
Smim12Q78RX3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim12Q78RX3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim12Q78RX3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim12Q78RX3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smim12Q78RX3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim12Q78RX3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smim12Q78RX3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim12Q78RX3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim12Q78RX3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim12Q78RX3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim12Q78RX3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim12Q78RX3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.68■□□□□ 0.58
Smim12Q78RX3 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.68■□□□□ 0.58
Smim12Q78RX3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim12Q78RX3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim12Q78RX3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim12Q78RX3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim12Q78RX3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.67■□□□□ 0.58
Smim12Q78RX3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim12Q78RX3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smim12Q78RX3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.66■□□□□ 0.58
Smim12Q78RX3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.66■□□□□ 0.58
Smim12Q78RX3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim12Q78RX3 Gm6821-201ENSMUST00000107540 542 ntBASIC18.66■□□□□ 0.58
Smim12Q78RX3 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.66■□□□□ 0.58
Smim12Q78RX3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim12Q78RX3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smim12Q78RX3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim12Q78RX3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim12Q78RX3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smim12Q78RX3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim12Q78RX3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim12Q78RX3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim12Q78RX3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim12Q78RX3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
Smim12Q78RX3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim12Q78RX3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.64■□□□□ 0.57
Smim12Q78RX3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smim12Q78RX3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim12Q78RX3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smim12Q78RX3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Smim12Q78RX3 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.64■□□□□ 0.57
Smim12Q78RX3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.64■□□□□ 0.57
Smim12Q78RX3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim12Q78RX3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smim12Q78RX3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Smim12Q78RX3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smim12Q78RX3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim12Q78RX3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim12Q78RX3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim12Q78RX3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim12Q78RX3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Smim12Q78RX3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim12Q78RX3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.63■□□□□ 0.57
Smim12Q78RX3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Smim12Q78RX3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim12Q78RX3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
Smim12Q78RX3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.62■□□□□ 0.57
Smim12Q78RX3 Gm9812-201ENSMUST00000061934 968 ntBASIC18.62■□□□□ 0.57
Smim12Q78RX3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.62■□□□□ 0.57
Smim12Q78RX3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim12Q78RX3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim12Q78RX3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim12Q78RX3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim12Q78RX3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim12Q78RX3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim12Q78RX3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smim12Q78RX3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim12Q78RX3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Smim12Q78RX3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.61■□□□□ 0.57
Smim12Q78RX3 Gm22567-201ENSMUST00000175542 342 ntBASIC18.61■□□□□ 0.57
Smim12Q78RX3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.61■□□□□ 0.57
Smim12Q78RX3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smim12Q78RX3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim12Q78RX3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim12Q78RX3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.6■□□□□ 0.57
Smim12Q78RX3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.6■□□□□ 0.57
Smim12Q78RX3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smim12Q78RX3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.6■□□□□ 0.57
Smim12Q78RX3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.6■□□□□ 0.57
Smim12Q78RX3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim12Q78RX3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Smim12Q78RX3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smim12Q78RX3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smim12Q78RX3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smim12Q78RX3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms