Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six3Q62233 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six3Q62233 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Six3Q62233 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.77■■□□□ 1.08
Six3Q62233 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six3Q62233 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Six3Q62233 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Six3Q62233 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.76■■□□□ 1.07
Six3Q62233 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Six3Q62233 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Six3Q62233 Gm45364-201ENSMUST00000210883 159 ntBASIC21.76■■□□□ 1.07
Six3Q62233 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Six3Q62233 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Six3Q62233 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.76■■□□□ 1.07
Six3Q62233 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Six3Q62233 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Six3Q62233 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Six3Q62233 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six3Q62233 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Six3Q62233 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Six3Q62233 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Six3Q62233 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six3Q62233 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six3Q62233 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six3Q62233 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Six3Q62233 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.74■■□□□ 1.07
Six3Q62233 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.74■■□□□ 1.07
Six3Q62233 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Six3Q62233 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Six3Q62233 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Six3Q62233 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Six3Q62233 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
Six3Q62233 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Six3Q62233 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Six3Q62233 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.73■■□□□ 1.07
Six3Q62233 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Six3Q62233 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Six3Q62233 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Six3Q62233 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Six3Q62233 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.72■■□□□ 1.07
Six3Q62233 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.72■■□□□ 1.07
Six3Q62233 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Six3Q62233 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Six3Q62233 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six3Q62233 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Six3Q62233 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six3Q62233 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Six3Q62233 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.7■■□□□ 1.07
Six3Q62233 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six3Q62233 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Six3Q62233 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six3Q62233 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six3Q62233 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six3Q62233 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.7■■□□□ 1.06
Six3Q62233 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six3Q62233 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six3Q62233 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six3Q62233 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six3Q62233 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six3Q62233 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Six3Q62233 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Six3Q62233 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six3Q62233 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Six3Q62233 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six3Q62233 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.68■■□□□ 1.06
Six3Q62233 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six3Q62233 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six3Q62233 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.68■■□□□ 1.06
Six3Q62233 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six3Q62233 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Six3Q62233 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Six3Q62233 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Six3Q62233 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Six3Q62233 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Six3Q62233 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Six3Q62233 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Six3Q62233 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Six3Q62233 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six3Q62233 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six3Q62233 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six3Q62233 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Six3Q62233 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.65■■□□□ 1.06
Six3Q62233 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Six3Q62233 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Six3Q62233 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Six3Q62233 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Six3Q62233 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Six3Q62233 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Six3Q62233 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Six3Q62233 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Six3Q62233 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six3Q62233 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six3Q62233 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.63■■□□□ 1.05
Six3Q62233 Terc-201ENSMUST00000082862 423 ntBASIC21.63■■□□□ 1.05
Six3Q62233 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six3Q62233 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six3Q62233 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six3Q62233 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.62■■□□□ 1.05
Six3Q62233 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Six3Q62233 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms