Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.11■■□□□ 1.29
Six1Q62231 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Six1Q62231 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.11■■□□□ 1.29
Six1Q62231 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Six1Q62231 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Six1Q62231 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.1■■□□□ 1.29
Six1Q62231 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Six1Q62231 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Six1Q62231 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Six1Q62231 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Six1Q62231 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Six1Q62231 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Six1Q62231 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Six1Q62231 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Six1Q62231 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Six1Q62231 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Six1Q62231 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.07■■□□□ 1.28
Six1Q62231 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Six1Q62231 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Six1Q62231 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Six1Q62231 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Six1Q62231 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Six1Q62231 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Six1Q62231 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Six1Q62231 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Six1Q62231 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Six1Q62231 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Six1Q62231 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Six1Q62231 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Six1Q62231 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.03■■□□□ 1.28
Six1Q62231 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.03■■□□□ 1.28
Six1Q62231 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Six1Q62231 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Six1Q62231 Gm9812-201ENSMUST00000061934 968 ntBASIC23.02■■□□□ 1.28
Six1Q62231 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Six1Q62231 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
Six1Q62231 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
Six1Q62231 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Six1Q62231 Gm4799-201ENSMUST00000095396 657 ntBASIC23.01■■□□□ 1.27
Six1Q62231 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Six1Q62231 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23■■□□□ 1.27
Six1Q62231 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Six1Q62231 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23■■□□□ 1.27
Six1Q62231 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Six1Q62231 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23■■□□□ 1.27
Six1Q62231 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23■■□□□ 1.27
Six1Q62231 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Six1Q62231 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Six1Q62231 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Six1Q62231 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Six1Q62231 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Six1Q62231 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Six1Q62231 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.99■■□□□ 1.27
Six1Q62231 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Six1Q62231 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Six1Q62231 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Six1Q62231 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.98■■□□□ 1.27
Six1Q62231 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Six1Q62231 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Six1Q62231 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.98■■□□□ 1.27
Six1Q62231 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.98■■□□□ 1.27
Six1Q62231 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.98■■□□□ 1.27
Six1Q62231 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Six1Q62231 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Six1Q62231 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Six1Q62231 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.97■■□□□ 1.27
Six1Q62231 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Six1Q62231 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Six1Q62231 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Six1Q62231 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.96■■□□□ 1.27
Six1Q62231 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Six1Q62231 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.96■■□□□ 1.27
Six1Q62231 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Six1Q62231 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
Six1Q62231 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Six1Q62231 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.95■■□□□ 1.26
Six1Q62231 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.95■■□□□ 1.26
Six1Q62231 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Six1Q62231 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Six1Q62231 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Six1Q62231 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Six1Q62231 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Six1Q62231 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Six1Q62231 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.94■■□□□ 1.26
Six1Q62231 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Six1Q62231 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Six1Q62231 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Six1Q62231 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Six1Q62231 Gm45364-201ENSMUST00000210883 159 ntBASIC22.93■■□□□ 1.26
Six1Q62231 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Six1Q62231 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Six1Q62231 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.92■■□□□ 1.26
Six1Q62231 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Six1Q62231 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Six1Q62231 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.92■■□□□ 1.26
Six1Q62231 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Six1Q62231 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Six1Q62231 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Six1Q62231 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.92■■□□□ 1.26
Six1Q62231 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms