Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Col11a1Q61245 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.01■■□□□ 1.76
Col11a1Q61245 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col11a1Q61245 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC26.01■■□□□ 1.75
Col11a1Q61245 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Col11a1Q61245 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC26■■□□□ 1.75
Col11a1Q61245 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Col11a1Q61245 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Col11a1Q61245 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Col11a1Q61245 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Col11a1Q61245 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Col11a1Q61245 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col11a1Q61245 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
Col11a1Q61245 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC25.98■■□□□ 1.75
Col11a1Q61245 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col11a1Q61245 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
Col11a1Q61245 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Col11a1Q61245 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC25.97■■□□□ 1.75
Col11a1Q61245 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col11a1Q61245 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col11a1Q61245 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC25.96■■□□□ 1.75
Col11a1Q61245 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Col11a1Q61245 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col11a1Q61245 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Col11a1Q61245 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC25.95■■□□□ 1.75
Col11a1Q61245 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Col11a1Q61245 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC25.95■■□□□ 1.75
Col11a1Q61245 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Col11a1Q61245 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Col11a1Q61245 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.94■■□□□ 1.74
Col11a1Q61245 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Col11a1Q61245 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col11a1Q61245 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Col11a1Q61245 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Col11a1Q61245 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.93■■□□□ 1.74
Col11a1Q61245 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Col11a1Q61245 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Col11a1Q61245 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.92■■□□□ 1.74
Col11a1Q61245 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Col11a1Q61245 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Col11a1Q61245 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC25.91■■□□□ 1.74
Col11a1Q61245 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.91■■□□□ 1.74
Col11a1Q61245 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Col11a1Q61245 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Col11a1Q61245 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
Col11a1Q61245 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Col11a1Q61245 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Col11a1Q61245 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
Col11a1Q61245 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Col11a1Q61245 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.89■■□□□ 1.74
Col11a1Q61245 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
Col11a1Q61245 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
Col11a1Q61245 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Col11a1Q61245 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col11a1Q61245 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col11a1Q61245 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Col11a1Q61245 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Col11a1Q61245 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Col11a1Q61245 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col11a1Q61245 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col11a1Q61245 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col11a1Q61245 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Col11a1Q61245 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Col11a1Q61245 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Col11a1Q61245 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Col11a1Q61245 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Col11a1Q61245 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.85■■□□□ 1.73
Col11a1Q61245 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Col11a1Q61245 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Col11a1Q61245 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Col11a1Q61245 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Col11a1Q61245 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Col11a1Q61245 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC25.84■■□□□ 1.73
Col11a1Q61245 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Col11a1Q61245 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.83■■□□□ 1.73
Col11a1Q61245 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Col11a1Q61245 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Col11a1Q61245 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC25.83■■□□□ 1.73
Col11a1Q61245 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC25.83■■□□□ 1.73
Col11a1Q61245 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Col11a1Q61245 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Col11a1Q61245 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Col11a1Q61245 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Col11a1Q61245 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.82■■□□□ 1.72
Col11a1Q61245 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.82■■□□□ 1.72
Col11a1Q61245 Etf1-202ENSMUST00000180351 108 ntBASIC25.81■■□□□ 1.72
Col11a1Q61245 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.81■■□□□ 1.72
Col11a1Q61245 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Col11a1Q61245 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Col11a1Q61245 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Col11a1Q61245 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Col11a1Q61245 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Col11a1Q61245 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Col11a1Q61245 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Col11a1Q61245 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC25.77■■□□□ 1.72
Col11a1Q61245 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col11a1Q61245 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col11a1Q61245 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col11a1Q61245 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Col11a1Q61245 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 319.4 ms