Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rc3h1Q4VGL6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rc3h1Q4VGL6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Rc3h1Q4VGL6 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.08■■□□□ 1.77
Rc3h1Q4VGL6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rc3h1Q4VGL6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rc3h1Q4VGL6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Rc3h1Q4VGL6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rc3h1Q4VGL6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rc3h1Q4VGL6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rc3h1Q4VGL6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rc3h1Q4VGL6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rc3h1Q4VGL6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC26.06■■□□□ 1.76
Rc3h1Q4VGL6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rc3h1Q4VGL6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rc3h1Q4VGL6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Rc3h1Q4VGL6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rc3h1Q4VGL6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rc3h1Q4VGL6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.04■■□□□ 1.76
Rc3h1Q4VGL6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rc3h1Q4VGL6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rc3h1Q4VGL6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rc3h1Q4VGL6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rc3h1Q4VGL6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rc3h1Q4VGL6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rc3h1Q4VGL6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rc3h1Q4VGL6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.01■■□□□ 1.75
Rc3h1Q4VGL6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rc3h1Q4VGL6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rc3h1Q4VGL6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26■■□□□ 1.75
Rc3h1Q4VGL6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.99■■□□□ 1.75
Rc3h1Q4VGL6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rc3h1Q4VGL6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
Rc3h1Q4VGL6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rc3h1Q4VGL6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rc3h1Q4VGL6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rc3h1Q4VGL6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rc3h1Q4VGL6 Gm7199-201ENSMUST00000118327 1485 ntBASIC25.98■■□□□ 1.75
Rc3h1Q4VGL6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Rc3h1Q4VGL6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rc3h1Q4VGL6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Rc3h1Q4VGL6 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.97■■□□□ 1.75
Rc3h1Q4VGL6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rc3h1Q4VGL6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rc3h1Q4VGL6 Gm5921-201ENSMUST00000075898 882 ntBASIC25.96■■□□□ 1.75
Rc3h1Q4VGL6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rc3h1Q4VGL6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rc3h1Q4VGL6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC25.96■■□□□ 1.75
Rc3h1Q4VGL6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rc3h1Q4VGL6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rc3h1Q4VGL6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rc3h1Q4VGL6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Rc3h1Q4VGL6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Rc3h1Q4VGL6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Rc3h1Q4VGL6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rc3h1Q4VGL6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25.93■■□□□ 1.74
Rc3h1Q4VGL6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Rc3h1Q4VGL6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Rc3h1Q4VGL6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Rc3h1Q4VGL6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rc3h1Q4VGL6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rc3h1Q4VGL6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Rc3h1Q4VGL6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.92■■□□□ 1.74
Rc3h1Q4VGL6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rc3h1Q4VGL6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Rc3h1Q4VGL6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rc3h1Q4VGL6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rc3h1Q4VGL6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.91■■□□□ 1.74
Rc3h1Q4VGL6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rc3h1Q4VGL6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rc3h1Q4VGL6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Rc3h1Q4VGL6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rc3h1Q4VGL6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rc3h1Q4VGL6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Rc3h1Q4VGL6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Rc3h1Q4VGL6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC25.89■■□□□ 1.74
Rc3h1Q4VGL6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Rc3h1Q4VGL6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rc3h1Q4VGL6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rc3h1Q4VGL6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.89■■□□□ 1.74
Rc3h1Q4VGL6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rc3h1Q4VGL6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
Rc3h1Q4VGL6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rc3h1Q4VGL6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rc3h1Q4VGL6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rc3h1Q4VGL6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Rc3h1Q4VGL6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rc3h1Q4VGL6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Rc3h1Q4VGL6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Rc3h1Q4VGL6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
Rc3h1Q4VGL6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rc3h1Q4VGL6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rc3h1Q4VGL6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.85■■□□□ 1.73
Rc3h1Q4VGL6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rc3h1Q4VGL6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rc3h1Q4VGL6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC25.83■■□□□ 1.73
Rc3h1Q4VGL6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rc3h1Q4VGL6 Gm13238-201ENSMUST00000117655 780 ntBASIC25.83■■□□□ 1.73
Rc3h1Q4VGL6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.83■■□□□ 1.73
Rc3h1Q4VGL6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms