Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Naf1Q3UMQ8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Naf1Q3UMQ8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
Naf1Q3UMQ8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.76■■□□□ 1.23
Naf1Q3UMQ8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Naf1Q3UMQ8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Naf1Q3UMQ8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Naf1Q3UMQ8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Naf1Q3UMQ8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Naf1Q3UMQ8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.74■■□□□ 1.23
Naf1Q3UMQ8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Naf1Q3UMQ8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Naf1Q3UMQ8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Naf1Q3UMQ8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Naf1Q3UMQ8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.73■■□□□ 1.23
Naf1Q3UMQ8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Naf1Q3UMQ8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Naf1Q3UMQ8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Naf1Q3UMQ8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Naf1Q3UMQ8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Naf1Q3UMQ8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Naf1Q3UMQ8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Naf1Q3UMQ8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.71■■□□□ 1.23
Naf1Q3UMQ8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Naf1Q3UMQ8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Naf1Q3UMQ8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Naf1Q3UMQ8 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.7■■□□□ 1.22
Naf1Q3UMQ8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Naf1Q3UMQ8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Naf1Q3UMQ8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Naf1Q3UMQ8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Naf1Q3UMQ8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Naf1Q3UMQ8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Naf1Q3UMQ8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Naf1Q3UMQ8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Naf1Q3UMQ8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Naf1Q3UMQ8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.68■■□□□ 1.22
Naf1Q3UMQ8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Naf1Q3UMQ8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Naf1Q3UMQ8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Naf1Q3UMQ8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Naf1Q3UMQ8 Gm5921-201ENSMUST00000075898 882 ntBASIC22.67■■□□□ 1.22
Naf1Q3UMQ8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Naf1Q3UMQ8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.66■■□□□ 1.22
Naf1Q3UMQ8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Naf1Q3UMQ8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Naf1Q3UMQ8 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.65■■□□□ 1.22
Naf1Q3UMQ8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Naf1Q3UMQ8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Naf1Q3UMQ8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Naf1Q3UMQ8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.65■■□□□ 1.22
Naf1Q3UMQ8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Naf1Q3UMQ8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.64■■□□□ 1.21
Naf1Q3UMQ8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Naf1Q3UMQ8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Naf1Q3UMQ8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Naf1Q3UMQ8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Naf1Q3UMQ8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.63■■□□□ 1.21
Naf1Q3UMQ8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Naf1Q3UMQ8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Naf1Q3UMQ8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Naf1Q3UMQ8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Naf1Q3UMQ8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Naf1Q3UMQ8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Naf1Q3UMQ8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Naf1Q3UMQ8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Naf1Q3UMQ8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Naf1Q3UMQ8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Naf1Q3UMQ8 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.61■■□□□ 1.21
Naf1Q3UMQ8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Naf1Q3UMQ8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Naf1Q3UMQ8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Naf1Q3UMQ8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Naf1Q3UMQ8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.6■■□□□ 1.21
Naf1Q3UMQ8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Naf1Q3UMQ8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Naf1Q3UMQ8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Naf1Q3UMQ8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Naf1Q3UMQ8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Naf1Q3UMQ8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.58■■□□□ 1.21
Naf1Q3UMQ8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Naf1Q3UMQ8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Naf1Q3UMQ8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Naf1Q3UMQ8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Naf1Q3UMQ8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.57■■□□□ 1.2
Naf1Q3UMQ8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Naf1Q3UMQ8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Naf1Q3UMQ8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Naf1Q3UMQ8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Naf1Q3UMQ8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Naf1Q3UMQ8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Naf1Q3UMQ8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Naf1Q3UMQ8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Naf1Q3UMQ8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Naf1Q3UMQ8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Naf1Q3UMQ8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Naf1Q3UMQ8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Naf1Q3UMQ8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Naf1Q3UMQ8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.54■■□□□ 1.2
Naf1Q3UMQ8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 118.1 ms