Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrra1Q3U3V8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Xrra1Q3U3V8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Xrra1Q3U3V8 Gm11687-201ENSMUST00000118911 886 ntBASIC21.23■□□□□ 0.99
Xrra1Q3U3V8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Xrra1Q3U3V8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Xrra1Q3U3V8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Xrra1Q3U3V8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Xrra1Q3U3V8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Xrra1Q3U3V8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Xrra1Q3U3V8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.22■□□□□ 0.99
Xrra1Q3U3V8 Mir6538-201ENSMUST00000183713 110 ntBASIC21.22■□□□□ 0.99
Xrra1Q3U3V8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Xrra1Q3U3V8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrra1Q3U3V8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrra1Q3U3V8 Terc-201ENSMUST00000082862 423 ntBASIC21.21■□□□□ 0.99
Xrra1Q3U3V8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrra1Q3U3V8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrra1Q3U3V8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrra1Q3U3V8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Xrra1Q3U3V8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Xrra1Q3U3V8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Xrra1Q3U3V8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Xrra1Q3U3V8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Xrra1Q3U3V8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrra1Q3U3V8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Xrra1Q3U3V8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Xrra1Q3U3V8 Gm11175-201ENSMUST00000116172 543 ntBASIC21.19■□□□□ 0.98
Xrra1Q3U3V8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Xrra1Q3U3V8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.19■□□□□ 0.98
Xrra1Q3U3V8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.19■□□□□ 0.98
Xrra1Q3U3V8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Xrra1Q3U3V8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Xrra1Q3U3V8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Xrra1Q3U3V8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Xrra1Q3U3V8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Xrra1Q3U3V8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Xrra1Q3U3V8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Xrra1Q3U3V8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Xrra1Q3U3V8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.17■□□□□ 0.98
Xrra1Q3U3V8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Xrra1Q3U3V8 Gm16437-201ENSMUST00000025669 507 ntBASIC21.17■□□□□ 0.98
Xrra1Q3U3V8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Xrra1Q3U3V8 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.17■□□□□ 0.98
Xrra1Q3U3V8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Xrra1Q3U3V8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Xrra1Q3U3V8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Xrra1Q3U3V8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Xrra1Q3U3V8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Xrra1Q3U3V8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Xrra1Q3U3V8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Xrra1Q3U3V8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Xrra1Q3U3V8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Xrra1Q3U3V8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Xrra1Q3U3V8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Xrra1Q3U3V8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
Xrra1Q3U3V8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Xrra1Q3U3V8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Xrra1Q3U3V8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Xrra1Q3U3V8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Xrra1Q3U3V8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.13■□□□□ 0.97
Xrra1Q3U3V8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Xrra1Q3U3V8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Xrra1Q3U3V8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Xrra1Q3U3V8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Xrra1Q3U3V8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Xrra1Q3U3V8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Xrra1Q3U3V8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Xrra1Q3U3V8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Xrra1Q3U3V8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Xrra1Q3U3V8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Xrra1Q3U3V8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Xrra1Q3U3V8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Xrra1Q3U3V8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Xrra1Q3U3V8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Xrra1Q3U3V8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Xrra1Q3U3V8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Xrra1Q3U3V8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Xrra1Q3U3V8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Xrra1Q3U3V8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Xrra1Q3U3V8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Xrra1Q3U3V8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Xrra1Q3U3V8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Xrra1Q3U3V8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Xrra1Q3U3V8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Xrra1Q3U3V8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Xrra1Q3U3V8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.1■□□□□ 0.97
Xrra1Q3U3V8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Xrra1Q3U3V8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrra1Q3U3V8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrra1Q3U3V8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrra1Q3U3V8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrra1Q3U3V8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.09■□□□□ 0.97
Xrra1Q3U3V8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrra1Q3U3V8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Xrra1Q3U3V8 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.08■□□□□ 0.97
Xrra1Q3U3V8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Xrra1Q3U3V8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Xrra1Q3U3V8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.08■□□□□ 0.97
Xrra1Q3U3V8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms