Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.97■□□□□ 0.95
Chd8Q09XV5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chd8Q09XV5 Gm22238-201ENSMUST00000175222 88 ntBASIC20.96■□□□□ 0.95
Chd8Q09XV5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Chd8Q09XV5 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.96■□□□□ 0.95
Chd8Q09XV5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd8Q09XV5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd8Q09XV5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chd8Q09XV5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Chd8Q09XV5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Chd8Q09XV5 Gm44428-201ENSMUST00000204474 874 ntBASIC20.96■□□□□ 0.95
Chd8Q09XV5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chd8Q09XV5 Gm5874-201ENSMUST00000096101 508 ntBASIC20.96■□□□□ 0.95
Chd8Q09XV5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Chd8Q09XV5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chd8Q09XV5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Chd8Q09XV5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd8Q09XV5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.94■□□□□ 0.94
Chd8Q09XV5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd8Q09XV5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd8Q09XV5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chd8Q09XV5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Chd8Q09XV5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chd8Q09XV5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Chd8Q09XV5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd8Q09XV5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chd8Q09XV5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd8Q09XV5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.93■□□□□ 0.94
Chd8Q09XV5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chd8Q09XV5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Chd8Q09XV5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.92■□□□□ 0.94
Chd8Q09XV5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Chd8Q09XV5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.92■□□□□ 0.94
Chd8Q09XV5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd8Q09XV5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chd8Q09XV5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd8Q09XV5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd8Q09XV5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chd8Q09XV5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd8Q09XV5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd8Q09XV5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.89■□□□□ 0.93
Chd8Q09XV5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.89■□□□□ 0.93
Chd8Q09XV5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.89■□□□□ 0.93
Chd8Q09XV5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Chd8Q09XV5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd8Q09XV5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chd8Q09XV5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd8Q09XV5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chd8Q09XV5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.88■□□□□ 0.93
Chd8Q09XV5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd8Q09XV5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd8Q09XV5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Chd8Q09XV5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chd8Q09XV5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd8Q09XV5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd8Q09XV5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chd8Q09XV5 Golgb1-201ENSMUST00000023534 498 ntBASIC20.87■□□□□ 0.93
Chd8Q09XV5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Chd8Q09XV5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd8Q09XV5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chd8Q09XV5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd8Q09XV5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chd8Q09XV5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.86■□□□□ 0.93
Chd8Q09XV5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.86■□□□□ 0.93
Chd8Q09XV5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.86■□□□□ 0.93
Chd8Q09XV5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chd8Q09XV5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.85■□□□□ 0.93
Chd8Q09XV5 Gm26571-201ENSMUST00000181399 666 ntBASIC20.85■□□□□ 0.93
Chd8Q09XV5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd8Q09XV5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chd8Q09XV5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chd8Q09XV5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd8Q09XV5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Chd8Q09XV5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd8Q09XV5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd8Q09XV5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chd8Q09XV5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chd8Q09XV5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Chd8Q09XV5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.84■□□□□ 0.93
Chd8Q09XV5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.83■□□□□ 0.93
Chd8Q09XV5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chd8Q09XV5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd8Q09XV5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.82■□□□□ 0.92
Chd8Q09XV5 Gm7291-201ENSMUST00000199147 382 ntBASIC20.82■□□□□ 0.92
Chd8Q09XV5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chd8Q09XV5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chd8Q09XV5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Chd8Q09XV5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd8Q09XV5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Chd8Q09XV5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Chd8Q09XV5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd8Q09XV5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.81■□□□□ 0.92
Chd8Q09XV5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chd8Q09XV5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd8Q09XV5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Chd8Q09XV5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd8Q09XV5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.79■□□□□ 0.92
Chd8Q09XV5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd8Q09XV5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.79■□□□□ 0.92
Chd8Q09XV5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms