Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h3bP84228 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h3bP84228 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h3bP84228 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h3bP84228 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h3bP84228 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h3bP84228 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h3bP84228 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h3bP84228 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h3bP84228 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h3bP84228 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h3bP84228 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hist1h3bP84228 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.49■□□□□ 0.71
Hist1h3bP84228 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hist1h3bP84228 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Hist1h3bP84228 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Hist1h3bP84228 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hist1h3bP84228 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hist1h3bP84228 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hist1h3bP84228 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hist1h3bP84228 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hist1h3bP84228 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
Hist1h3bP84228 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
Hist1h3bP84228 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h3bP84228 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.47■□□□□ 0.71
Hist1h3bP84228 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h3bP84228 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.47■□□□□ 0.71
Hist1h3bP84228 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h3bP84228 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Hist1h3bP84228 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h3bP84228 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hist1h3bP84228 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h3bP84228 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Hist1h3bP84228 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hist1h3bP84228 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Hist1h3bP84228 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Hist1h3bP84228 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hist1h3bP84228 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hist1h3bP84228 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3bP84228 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3bP84228 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3bP84228 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3bP84228 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Hist1h3bP84228 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.45■□□□□ 0.7
Hist1h3bP84228 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3bP84228 Gm6311-201ENSMUST00000073790 878 ntBASIC19.45■□□□□ 0.7
Hist1h3bP84228 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3bP84228 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.45■□□□□ 0.7
Hist1h3bP84228 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h3bP84228 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h3bP84228 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h3bP84228 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.44■□□□□ 0.7
Hist1h3bP84228 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h3bP84228 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h3bP84228 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h3bP84228 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.44■□□□□ 0.7
Hist1h3bP84228 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h3bP84228 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.44■□□□□ 0.7
Hist1h3bP84228 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h3bP84228 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h3bP84228 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h3bP84228 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h3bP84228 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h3bP84228 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h3bP84228 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.43■□□□□ 0.7
Hist1h3bP84228 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h3bP84228 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h3bP84228 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.42■□□□□ 0.7
Hist1h3bP84228 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h3bP84228 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.42■□□□□ 0.7
Hist1h3bP84228 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.42■□□□□ 0.7
Hist1h3bP84228 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h3bP84228 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h3bP84228 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h3bP84228 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h3bP84228 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hist1h3bP84228 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Hist1h3bP84228 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
Hist1h3bP84228 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h3bP84228 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hist1h3bP84228 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hist1h3bP84228 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h3bP84228 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hist1h3bP84228 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Hist1h3bP84228 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.4■□□□□ 0.7
Hist1h3bP84228 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h3bP84228 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h3bP84228 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.39■□□□□ 0.69
Hist1h3bP84228 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h3bP84228 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h3bP84228 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Hist1h3bP84228 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.39■□□□□ 0.69
Hist1h3bP84228 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hist1h3bP84228 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.38■□□□□ 0.69
Hist1h3bP84228 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hist1h3bP84228 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h3bP84228 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.37■□□□□ 0.69
Hist1h3bP84228 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h3bP84228 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h3bP84228 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms