Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Nek1P51954 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Nek1P51954 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Nek1P51954 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Nek1P51954 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Nek1P51954 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Nek1P51954 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Nek1P51954 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Nek1P51954 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Nek1P51954 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Nek1P51954 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.79■■□□□ 1.56
Nek1P51954 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.79■■□□□ 1.56
Nek1P51954 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Nek1P51954 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Nek1P51954 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Nek1P51954 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Nek1P51954 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Nek1P51954 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nek1P51954 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nek1P51954 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Nek1P51954 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.78■■□□□ 1.56
Nek1P51954 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nek1P51954 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nek1P51954 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Nek1P51954 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nek1P51954 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nek1P51954 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nek1P51954 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Nek1P51954 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nek1P51954 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nek1P51954 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Nek1P51954 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Nek1P51954 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nek1P51954 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nek1P51954 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Nek1P51954 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Nek1P51954 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Nek1P51954 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Nek1P51954 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Nek1P51954 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Nek1P51954 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Nek1P51954 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.75■■□□□ 1.55
Nek1P51954 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Nek1P51954 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Nek1P51954 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Nek1P51954 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Nek1P51954 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.74■■□□□ 1.55
Nek1P51954 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Nek1P51954 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Nek1P51954 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Nek1P51954 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.73■■□□□ 1.55
Nek1P51954 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Nek1P51954 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Nek1P51954 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Nek1P51954 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Nek1P51954 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Nek1P51954 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Nek1P51954 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Nek1P51954 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Nek1P51954 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Nek1P51954 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Nek1P51954 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Nek1P51954 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Nek1P51954 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.7■■□□□ 1.54
Nek1P51954 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Nek1P51954 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.69■■□□□ 1.54
Nek1P51954 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Nek1P51954 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Nek1P51954 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Nek1P51954 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.69■■□□□ 1.54
Nek1P51954 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Nek1P51954 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Nek1P51954 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Nek1P51954 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Nek1P51954 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.68■■□□□ 1.54
Nek1P51954 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Nek1P51954 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Nek1P51954 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.67■■□□□ 1.54
Nek1P51954 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Nek1P51954 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.67■■□□□ 1.54
Nek1P51954 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.67■■□□□ 1.54
Nek1P51954 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.66■■□□□ 1.54
Nek1P51954 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nek1P51954 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nek1P51954 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nek1P51954 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Nek1P51954 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
Nek1P51954 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Nek1P51954 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC24.65■■□□□ 1.54
Nek1P51954 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Nek1P51954 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Nek1P51954 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
Nek1P51954 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Nek1P51954 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Nek1P51954 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.65■■□□□ 1.54
Nek1P51954 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Nek1P51954 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Nek1P51954 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC24.64■■□□□ 1.54
Nek1P51954 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Nek1P51954 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms