Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd28P31041 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd28P31041 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd28P31041 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd28P31041 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cd28P31041 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cd28P31041 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd28P31041 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd28P31041 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd28P31041 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cd28P31041 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cd28P31041 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cd28P31041 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.61■□□□□ 0.73
Cd28P31041 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cd28P31041 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.61■□□□□ 0.73
Cd28P31041 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd28P31041 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd28P31041 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd28P31041 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd28P31041 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cd28P31041 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd28P31041 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd28P31041 Gm45855-201ENSMUST00000212546 880 ntBASIC19.59■□□□□ 0.73
Cd28P31041 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cd28P31041 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd28P31041 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.59■□□□□ 0.73
Cd28P31041 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd28P31041 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cd28P31041 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.73
Cd28P31041 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cd28P31041 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cd28P31041 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd28P31041 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.57■□□□□ 0.72
Cd28P31041 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cd28P31041 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Cd28P31041 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.57■□□□□ 0.72
Cd28P31041 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cd28P31041 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.56■□□□□ 0.72
Cd28P31041 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd28P31041 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd28P31041 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cd28P31041 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cd28P31041 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cd28P31041 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cd28P31041 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd28P31041 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd28P31041 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cd28P31041 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd28P31041 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd28P31041 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cd28P31041 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.54■□□□□ 0.72
Cd28P31041 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd28P31041 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cd28P31041 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.53■□□□□ 0.72
Cd28P31041 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cd28P31041 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.53■□□□□ 0.72
Cd28P31041 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cd28P31041 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cd28P31041 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Cd28P31041 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cd28P31041 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cd28P31041 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cd28P31041 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.52■□□□□ 0.71
Cd28P31041 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd28P31041 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cd28P31041 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Cd28P31041 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.51■□□□□ 0.71
Cd28P31041 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.51■□□□□ 0.71
Cd28P31041 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.51■□□□□ 0.71
Cd28P31041 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cd28P31041 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Cd28P31041 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.5■□□□□ 0.71
Cd28P31041 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cd28P31041 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
Cd28P31041 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cd28P31041 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cd28P31041 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cd28P31041 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd28P31041 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.49■□□□□ 0.71
Cd28P31041 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd28P31041 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd28P31041 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cd28P31041 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd28P31041 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd28P31041 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cd28P31041 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd28P31041 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd28P31041 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd28P31041 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cd28P31041 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cd28P31041 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cd28P31041 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd28P31041 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.47■□□□□ 0.71
Cd28P31041 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.47■□□□□ 0.71
Cd28P31041 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd28P31041 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd28P31041 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cd28P31041 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd28P31041 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd28P31041 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms