Protein–RNA interactions for Protein: P28334

Htr1b, 5-hydroxytryptamine receptor 1B, mousemouse

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htr1bP28334 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Htr1bP28334 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Htr1bP28334 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.63■□□□□ 0.89
Htr1bP28334 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Htr1bP28334 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Htr1bP28334 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Htr1bP28334 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Htr1bP28334 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Htr1bP28334 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Htr1bP28334 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.62■□□□□ 0.89
Htr1bP28334 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Htr1bP28334 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.62■□□□□ 0.89
Htr1bP28334 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.62■□□□□ 0.89
Htr1bP28334 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.61■□□□□ 0.89
Htr1bP28334 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Htr1bP28334 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Htr1bP28334 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.6■□□□□ 0.89
Htr1bP28334 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.6■□□□□ 0.89
Htr1bP28334 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Htr1bP28334 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Htr1bP28334 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Htr1bP28334 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Htr1bP28334 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Htr1bP28334 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Htr1bP28334 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Htr1bP28334 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Htr1bP28334 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Htr1bP28334 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Htr1bP28334 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Htr1bP28334 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Htr1bP28334 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.57■□□□□ 0.88
Htr1bP28334 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.57■□□□□ 0.88
Htr1bP28334 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Htr1bP28334 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Htr1bP28334 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Htr1bP28334 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Htr1bP28334 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Htr1bP28334 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Htr1bP28334 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Htr1bP28334 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Htr1bP28334 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Htr1bP28334 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Htr1bP28334 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Htr1bP28334 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Htr1bP28334 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Htr1bP28334 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Htr1bP28334 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Htr1bP28334 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.52■□□□□ 0.88
Htr1bP28334 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Htr1bP28334 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Htr1bP28334 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Htr1bP28334 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Htr1bP28334 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Htr1bP28334 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.51■□□□□ 0.87
Htr1bP28334 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.51■□□□□ 0.87
Htr1bP28334 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.51■□□□□ 0.87
Htr1bP28334 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Htr1bP28334 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Htr1bP28334 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Htr1bP28334 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Htr1bP28334 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.5■□□□□ 0.87
Htr1bP28334 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Htr1bP28334 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Htr1bP28334 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Htr1bP28334 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.5■□□□□ 0.87
Htr1bP28334 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Htr1bP28334 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Htr1bP28334 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Htr1bP28334 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Htr1bP28334 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Htr1bP28334 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Htr1bP28334 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Htr1bP28334 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Htr1bP28334 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Htr1bP28334 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Htr1bP28334 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Htr1bP28334 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Htr1bP28334 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Htr1bP28334 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Htr1bP28334 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Htr1bP28334 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.47■□□□□ 0.87
Htr1bP28334 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.47■□□□□ 0.87
Htr1bP28334 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Htr1bP28334 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Htr1bP28334 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Htr1bP28334 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Htr1bP28334 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Htr1bP28334 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Htr1bP28334 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Htr1bP28334 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Htr1bP28334 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Htr1bP28334 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Htr1bP28334 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Htr1bP28334 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.44■□□□□ 0.86
Htr1bP28334 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Htr1bP28334 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Htr1bP28334 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Htr1bP28334 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Htr1bP28334 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Htr1bP28334 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms