Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgn1P18608 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgn1P18608 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgn1P18608 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgn1P18608 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Hmgn1P18608 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Hmgn1P18608 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgn1P18608 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
Hmgn1P18608 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.41■□□□□ 0.86
Hmgn1P18608 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn1P18608 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.41■□□□□ 0.86
Hmgn1P18608 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Hmgn1P18608 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Hmgn1P18608 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn1P18608 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn1P18608 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn1P18608 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.4■□□□□ 0.86
Hmgn1P18608 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmgn1P18608 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.39■□□□□ 0.86
Hmgn1P18608 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgn1P18608 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.38■□□□□ 0.85
Hmgn1P18608 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn1P18608 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.38■□□□□ 0.85
Hmgn1P18608 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.38■□□□□ 0.85
Hmgn1P18608 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn1P18608 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn1P18608 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn1P18608 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.38■□□□□ 0.85
Hmgn1P18608 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Hmgn1P18608 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgn1P18608 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Hmgn1P18608 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn1P18608 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn1P18608 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn1P18608 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn1P18608 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgn1P18608 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.35■□□□□ 0.85
Hmgn1P18608 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgn1P18608 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgn1P18608 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgn1P18608 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgn1P18608 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgn1P18608 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgn1P18608 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgn1P18608 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgn1P18608 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgn1P18608 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hmgn1P18608 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Hmgn1P18608 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hmgn1P18608 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hmgn1P18608 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hmgn1P18608 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hmgn1P18608 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmgn1P18608 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmgn1P18608 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.33■□□□□ 0.84
Hmgn1P18608 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmgn1P18608 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.32■□□□□ 0.84
Hmgn1P18608 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmgn1P18608 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmgn1P18608 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Hmgn1P18608 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmgn1P18608 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmgn1P18608 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmgn1P18608 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmgn1P18608 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hmgn1P18608 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmgn1P18608 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmgn1P18608 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmgn1P18608 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgn1P18608 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgn1P18608 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.29■□□□□ 0.84
Hmgn1P18608 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgn1P18608 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hmgn1P18608 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgn1P18608 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgn1P18608 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn1P18608 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Hmgn1P18608 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn1P18608 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn1P18608 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn1P18608 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.27■□□□□ 0.84
Hmgn1P18608 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.27■□□□□ 0.83
Hmgn1P18608 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.26■□□□□ 0.83
Hmgn1P18608 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.26■□□□□ 0.83
Hmgn1P18608 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgn1P18608 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgn1P18608 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Hmgn1P18608 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.25■□□□□ 0.83
Hmgn1P18608 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn1P18608 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn1P18608 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.25■□□□□ 0.83
Hmgn1P18608 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Hmgn1P18608 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Hmgn1P18608 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn1P18608 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn1P18608 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn1P18608 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.24■□□□□ 0.83
Hmgn1P18608 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn1P18608 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn1P18608 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms