Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.01■□□□□ 0.63
H3f3cP02301 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
H3f3cP02301 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
H3f3cP02301 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H3f3cP02301 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H3f3cP02301 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H3f3cP02301 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H3f3cP02301 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19■□□□□ 0.63
H3f3cP02301 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19■□□□□ 0.63
H3f3cP02301 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
H3f3cP02301 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19■□□□□ 0.63
H3f3cP02301 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
H3f3cP02301 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
H3f3cP02301 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H3f3cP02301 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
H3f3cP02301 Mir6538-201ENSMUST00000183713 110 ntBASIC18.99■□□□□ 0.63
H3f3cP02301 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.99■□□□□ 0.63
H3f3cP02301 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
H3f3cP02301 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H3f3cP02301 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H3f3cP02301 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.98■□□□□ 0.63
H3f3cP02301 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H3f3cP02301 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
H3f3cP02301 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
H3f3cP02301 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
H3f3cP02301 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.97■□□□□ 0.63
H3f3cP02301 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3cP02301 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.97■□□□□ 0.63
H3f3cP02301 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3cP02301 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3cP02301 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3cP02301 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3cP02301 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
H3f3cP02301 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
H3f3cP02301 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H3f3cP02301 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H3f3cP02301 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
H3f3cP02301 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H3f3cP02301 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H3f3cP02301 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
H3f3cP02301 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H3f3cP02301 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
H3f3cP02301 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
H3f3cP02301 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
H3f3cP02301 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H3f3cP02301 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.95■□□□□ 0.62
H3f3cP02301 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
H3f3cP02301 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
H3f3cP02301 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H3f3cP02301 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H3f3cP02301 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
H3f3cP02301 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
H3f3cP02301 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H3f3cP02301 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H3f3cP02301 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H3f3cP02301 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
H3f3cP02301 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H3f3cP02301 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.92■□□□□ 0.62
H3f3cP02301 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
H3f3cP02301 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.92■□□□□ 0.62
H3f3cP02301 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.92■□□□□ 0.62
H3f3cP02301 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
H3f3cP02301 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.91■□□□□ 0.62
H3f3cP02301 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
H3f3cP02301 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
H3f3cP02301 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3cP02301 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3cP02301 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3cP02301 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
H3f3cP02301 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3cP02301 Gm44428-201ENSMUST00000204474 874 ntBASIC18.9■□□□□ 0.62
H3f3cP02301 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3cP02301 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3cP02301 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.9■□□□□ 0.62
H3f3cP02301 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3cP02301 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3cP02301 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3cP02301 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H3f3cP02301 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
H3f3cP02301 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.62
H3f3cP02301 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H3f3cP02301 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.89■□□□□ 0.61
H3f3cP02301 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.89■□□□□ 0.61
H3f3cP02301 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H3f3cP02301 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
H3f3cP02301 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3cP02301 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3cP02301 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3cP02301 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3cP02301 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3cP02301 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3cP02301 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3f3cP02301 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
H3f3cP02301 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.87■□□□□ 0.61
H3f3cP02301 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
H3f3cP02301 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3f3cP02301 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3f3cP02301 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3f3cP02301 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3f3cP02301 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms