Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
IghmP01872 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21■□□□□ 0.95
IghmP01872 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IghmP01872 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
IghmP01872 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.99■□□□□ 0.95
IghmP01872 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IghmP01872 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
IghmP01872 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IghmP01872 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
IghmP01872 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.99■□□□□ 0.95
IghmP01872 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
IghmP01872 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.98■□□□□ 0.95
IghmP01872 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IghmP01872 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IghmP01872 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IghmP01872 Gm45364-201ENSMUST00000210883 159 ntBASIC20.98■□□□□ 0.95
IghmP01872 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
IghmP01872 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
IghmP01872 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IghmP01872 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IghmP01872 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IghmP01872 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IghmP01872 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IghmP01872 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IghmP01872 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IghmP01872 Gm11599-201ENSMUST00000118720 878 ntBASIC20.96■□□□□ 0.95
IghmP01872 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IghmP01872 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
IghmP01872 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.96■□□□□ 0.95
IghmP01872 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
IghmP01872 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IghmP01872 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
IghmP01872 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.95■□□□□ 0.94
IghmP01872 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.95■□□□□ 0.94
IghmP01872 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
IghmP01872 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
IghmP01872 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.95■□□□□ 0.94
IghmP01872 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IghmP01872 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IghmP01872 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IghmP01872 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IghmP01872 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
IghmP01872 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IghmP01872 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IghmP01872 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.93■□□□□ 0.94
IghmP01872 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IghmP01872 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IghmP01872 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
IghmP01872 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IghmP01872 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IghmP01872 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IghmP01872 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
IghmP01872 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IghmP01872 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IghmP01872 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IghmP01872 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
IghmP01872 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IghmP01872 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IghmP01872 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IghmP01872 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IghmP01872 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IghmP01872 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
IghmP01872 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IghmP01872 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.9■□□□□ 0.94
IghmP01872 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.9■□□□□ 0.94
IghmP01872 Terc-201ENSMUST00000082862 423 ntBASIC20.9■□□□□ 0.94
IghmP01872 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
IghmP01872 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IghmP01872 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IghmP01872 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IghmP01872 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IghmP01872 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
IghmP01872 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
IghmP01872 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IghmP01872 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
IghmP01872 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IghmP01872 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IghmP01872 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
IghmP01872 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IghmP01872 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IghmP01872 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IghmP01872 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
IghmP01872 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
IghmP01872 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IghmP01872 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IghmP01872 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
IghmP01872 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IghmP01872 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
IghmP01872 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
IghmP01872 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IghmP01872 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IghmP01872 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
IghmP01872 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.85■□□□□ 0.93
IghmP01872 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IghmP01872 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IghmP01872 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
IghmP01872 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
IghmP01872 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IghmP01872 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
IghmP01872 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms