Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ifna1P01572 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ifna1P01572 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ifna1P01572 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ifna1P01572 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ifna1P01572 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ifna1P01572 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ifna1P01572 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.76■□□□□ 0.59
Ifna1P01572 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ifna1P01572 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.76■□□□□ 0.59
Ifna1P01572 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ifna1P01572 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ifna1P01572 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.75■□□□□ 0.59
Ifna1P01572 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.75■□□□□ 0.59
Ifna1P01572 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.74■□□□□ 0.59
Ifna1P01572 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ifna1P01572 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ifna1P01572 Gm37136-201ENSMUST00000194368 194 ntBASIC18.74■□□□□ 0.59
Ifna1P01572 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Ifna1P01572 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ifna1P01572 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ifna1P01572 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ifna1P01572 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ifna1P01572 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ifna1P01572 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ifna1P01572 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Ifna1P01572 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ifna1P01572 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ifna1P01572 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ifna1P01572 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ifna1P01572 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ifna1P01572 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ifna1P01572 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ifna1P01572 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.71■□□□□ 0.59
Ifna1P01572 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ifna1P01572 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ifna1P01572 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ifna1P01572 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ifna1P01572 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
Ifna1P01572 Nkain2-201ENSMUST00000092602 558 ntBASIC18.7■□□□□ 0.58
Ifna1P01572 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.7■□□□□ 0.58
Ifna1P01572 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ifna1P01572 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ifna1P01572 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ifna1P01572 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ifna1P01572 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ifna1P01572 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ifna1P01572 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ifna1P01572 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ifna1P01572 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.68■□□□□ 0.58
Ifna1P01572 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ifna1P01572 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ifna1P01572 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ifna1P01572 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ifna1P01572 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ifna1P01572 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Ifna1P01572 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ifna1P01572 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ifna1P01572 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ifna1P01572 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ifna1P01572 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ifna1P01572 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Ifna1P01572 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ifna1P01572 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ifna1P01572 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ifna1P01572 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ifna1P01572 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ifna1P01572 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ifna1P01572 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ifna1P01572 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ifna1P01572 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ifna1P01572 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.64■□□□□ 0.57
Ifna1P01572 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ifna1P01572 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ifna1P01572 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ifna1P01572 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ifna1P01572 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ifna1P01572 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ifna1P01572 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ifna1P01572 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ifna1P01572 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ifna1P01572 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ifna1P01572 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ifna1P01572 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.62■□□□□ 0.57
Ifna1P01572 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ifna1P01572 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ifna1P01572 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ifna1P01572 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ifna1P01572 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ifna1P01572 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ifna1P01572 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ifna1P01572 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ifna1P01572 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ifna1P01572 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ifna1P01572 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ifna1P01572 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ifna1P01572 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ifna1P01572 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ifna1P01572 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ifna1P01572 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms