Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Hdac3O88895 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac3O88895 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac3O88895 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.78■□□□□ 0.76
Hdac3O88895 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Hdac3O88895 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hdac3O88895 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Hdac3O88895 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Hdac3O88895 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac3O88895 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac3O88895 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hdac3O88895 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Hdac3O88895 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Hdac3O88895 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Hdac3O88895 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac3O88895 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac3O88895 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.76■□□□□ 0.75
Hdac3O88895 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Hdac3O88895 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hdac3O88895 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Hdac3O88895 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac3O88895 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac3O88895 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.75■□□□□ 0.75
Hdac3O88895 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac3O88895 Gm9812-201ENSMUST00000061934 968 ntBASIC19.75■□□□□ 0.75
Hdac3O88895 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac3O88895 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac3O88895 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.74■□□□□ 0.75
Hdac3O88895 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Hdac3O88895 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.74■□□□□ 0.75
Hdac3O88895 Mir3960-201ENSMUST00000198213 73 ntBASIC19.74■□□□□ 0.75
Hdac3O88895 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.74■□□□□ 0.75
Hdac3O88895 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac3O88895 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Hdac3O88895 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.73■□□□□ 0.75
Hdac3O88895 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.73■□□□□ 0.75
Hdac3O88895 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hdac3O88895 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac3O88895 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.72■□□□□ 0.75
Hdac3O88895 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hdac3O88895 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac3O88895 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac3O88895 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.71■□□□□ 0.75
Hdac3O88895 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hdac3O88895 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac3O88895 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hdac3O88895 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.7■□□□□ 0.74
Hdac3O88895 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac3O88895 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac3O88895 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Hdac3O88895 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Hdac3O88895 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac3O88895 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac3O88895 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac3O88895 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hdac3O88895 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac3O88895 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac3O88895 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac3O88895 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac3O88895 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac3O88895 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac3O88895 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Hdac3O88895 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac3O88895 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac3O88895 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac3O88895 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac3O88895 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac3O88895 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.66■□□□□ 0.74
Hdac3O88895 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac3O88895 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac3O88895 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac3O88895 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac3O88895 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hdac3O88895 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.66■□□□□ 0.74
Hdac3O88895 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac3O88895 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.65■□□□□ 0.74
Hdac3O88895 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac3O88895 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.65■□□□□ 0.74
Hdac3O88895 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac3O88895 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac3O88895 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac3O88895 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac3O88895 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hdac3O88895 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Hdac3O88895 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.64■□□□□ 0.73
Hdac3O88895 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac3O88895 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac3O88895 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac3O88895 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac3O88895 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac3O88895 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac3O88895 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac3O88895 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.63■□□□□ 0.73
Hdac3O88895 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac3O88895 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hdac3O88895 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac3O88895 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hdac3O88895 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac3O88895 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac3O88895 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms