Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cops3O88543 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cops3O88543 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cops3O88543 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cops3O88543 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Cops3O88543 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops3O88543 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cops3O88543 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops3O88543 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cops3O88543 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops3O88543 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 Gm6821-201ENSMUST00000107540 542 ntBASIC19.86■□□□□ 0.77
Cops3O88543 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cops3O88543 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cops3O88543 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.85■□□□□ 0.77
Cops3O88543 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops3O88543 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops3O88543 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.85■□□□□ 0.77
Cops3O88543 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.85■□□□□ 0.77
Cops3O88543 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cops3O88543 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops3O88543 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops3O88543 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.84■□□□□ 0.77
Cops3O88543 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops3O88543 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cops3O88543 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cops3O88543 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops3O88543 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cops3O88543 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.83■□□□□ 0.77
Cops3O88543 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cops3O88543 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cops3O88543 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cops3O88543 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cops3O88543 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cops3O88543 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops3O88543 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops3O88543 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops3O88543 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cops3O88543 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cops3O88543 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cops3O88543 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cops3O88543 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cops3O88543 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.8■□□□□ 0.76
Cops3O88543 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops3O88543 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops3O88543 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops3O88543 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops3O88543 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops3O88543 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops3O88543 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cops3O88543 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops3O88543 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cops3O88543 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops3O88543 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops3O88543 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops3O88543 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cops3O88543 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops3O88543 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.77■□□□□ 0.75
Cops3O88543 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cops3O88543 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops3O88543 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cops3O88543 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cops3O88543 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.76■□□□□ 0.75
Cops3O88543 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.76■□□□□ 0.75
Cops3O88543 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops3O88543 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.75■□□□□ 0.75
Cops3O88543 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops3O88543 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops3O88543 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops3O88543 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.75■□□□□ 0.75
Cops3O88543 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops3O88543 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.74■□□□□ 0.75
Cops3O88543 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cops3O88543 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops3O88543 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cops3O88543 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops3O88543 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops3O88543 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.73■□□□□ 0.75
Cops3O88543 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops3O88543 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops3O88543 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cops3O88543 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.73■□□□□ 0.75
Cops3O88543 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.73■□□□□ 0.75
Cops3O88543 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops3O88543 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cops3O88543 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.72■□□□□ 0.75
Cops3O88543 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Cops3O88543 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.72■□□□□ 0.75
Cops3O88543 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.72■□□□□ 0.75
Cops3O88543 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops3O88543 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cops3O88543 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cops3O88543 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops3O88543 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms